Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0920 ATGGAGAATCACAGGGTGGAGGAATCGGTGCATGTGAGGGAGGAAGGTGAGGGTGATAACGTGGCAGTGGAGAAAGAGGAGGAGGATCAAGAAAATGACGTTGGTTCCAGCATCACCTTGGAGAGGGTCGCTGCTGCTAAGAAATTCATTGAGAATCATTACAGGTCCCAGAGGAAGCACATCCAAGAACGCAAGGAGAGGCGTTTAATGCTAGAAAAGAGGTTAAAGTCTTCTCAAGTACCAGAAGAGGAACAGATCAATCTATTGAAGGATTTAGAGCTCAAGGAAACTGAGTATATGCGGTTAAAAAGGCATAAAATATGTGTTGATGATTTTGACCTTCTAACCATTATTGGCAGGGGAGCCTTTGGGGAGGTTGAGCATGTTAGAGCTGAAAGGAATGTACTTGCAGAAGTTGCTTGTGACTGCATTGTGAAACTCTATTACTCTTTTCAAGATGCTGAATACTTGTATCTCATAATGGAATATTTGCCTGGTGGTGATATAATGACTTTGTTGATGAGGGAAGAAACTTTGACTGAAACTGTGGCTAGATTTTACATTGCGCAAAGCGTTGTGGCCATAGAGTCTATTCATAAACACAACTACATTCATCGAGATATAAAACCTGACAACCTTTTATTGGACCAATATGGTCACATGAAGCTGTCTGATTTTGGTCTTTGCAAGCCACTTGACTGCTCAAGTCTATCATCTATTAGTGAAAATGAAATCCTGAATGACGAGAACTTGAATGATACCATGGATGTTGATGGAGCTATGCCGAATGGAAGAAACGGTAGGCGCTGGAAAAGTCCCCTTGAACAACTTCAACATTGGCAAATTAACAGGAGGAAGTTGGTAATTGCCTTTTCTGCCCATGCTCAGAAGTTGTATTTGATGATTGCCTGGTGGTCTCTTGGTGCTATAATGTACGAAATGCTAGTTGGATATCCTCCATTTTACTCTGATGATCCCGTATCAACATGCAGAAAGATTGTGCATTGGAAAAATCACTTGAAATTTCCGGAGGAGGCCAGATTGACACCTGAAGCCAAGGATCTAATATGCAGCTTGCTCTGTAGTGTTCCACAAAGGCTTGGCACTAGAGGAGCAGATGAAATTAAAGCTCATCCTTGGTTCAAAGATGTCATGTGGGACAGGCTCTATGAAATGGAGGCAGCATTTAAACCACAAGTCAATGGAGAGCTTGACACTCAGAATTTTATGAAATTTGATGAGGTTGAACTACCAACACCAACTAGATCTGGATCTGGACCCTTCAGAAAGAAGCTCTTAACTACTCAAGATCTCAGTTTTGTTGGTTATACATATAAGAATTTTGCTGCTGTCAAGGGGAAGCCGCGTCAATCTAATAATGCTAAAAAGGATTATACTACTTTTGTTGAAGGCGATGCAGATTTAGGGAGCTCGTCACCAAAGCGAACATCCATCGACTCTGCACACAGTGATTCTGGAGTAAACTATTCCACCTGA 1497 0.4182 MENHRVEESVHVREEGEGDNVAVEKEEEDQENDVGSSITLERVAAAKKFIENHYRSQRKHIQERKERRLMLEKRLKSSQVPEEEQINLLKDLELKETEYMRLKRHKICVDDFDLLTIIGRGAFGEVEHVRAERNVLAEVACDCIVKLYYSFQDAEYLYLIMEYLPGGDIMTLLMREETLTETVARFYIAQSVVAIESIHKHNYIHRDIKPDNLLLDQYGHMKLSDFGLCKPLDCSSLSSISENEILNDENLNDTMDVDGAMPNGRNGRRWKSPLEQLQHWQINRRKLVIAFSAHAQKLYLMIAWWSLGAIMYEMLVGYPPFYSDDPVSTCRKIVHWKNHLKFPEEARLTPEAKDLICSLLCSVPQRLGTRGADEIKAHPWFKDVMWDRLYEMEAAFKPQVNGELDTQNFMKFDEVELPTPTRSGSGPFRKKLLTTQDLSFVGYTYKNFAAVKGKPRQSNNAKKDYTTFVEGDADLGSSSPKRTSIDSAHSDSGVNYST 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0920 498 Gene3D Transferase(Phosphotransferase) domain 1 168 234 - -
Aed4g0920 498 Gene3D Transferase(Phosphotransferase) domain 1 296 401 - -
Aed4g0920 498 ProSitePatterns Protein kinases ATP-binding region signature. 118 146 IPR017441 GO:0005524
Aed4g0920 498 SMART serkin_6 112 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0920 498 MobiDBLite consensus disorder prediction 470 498 - -
Aed4g0920 498 MobiDBLite consensus disorder prediction 1 20 - -
Aed4g0920 498 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 125 465 - -
Aed4g0920 498 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 26 126 - -
Aed4g0920 498 Pfam Protein kinase domain 302 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0920 498 Pfam Protein kinase domain 127 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0920 498 ProSiteProfiles AGC-kinase C-terminal domain profile. 382 455 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aed4g0920 498 MobiDBLite consensus disorder prediction 1 38 - -
Aed4g0920 498 Gene3D Phosphorylase Kinase; domain 1 51 128 - -
Aed4g0920 498 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 126 - -
Aed4g0920 498 PANTHER SERINE/THREONINE-PROTEIN KINASE 125 465 - -
Aed4g0920 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Aed4g0920 498 SUPERFAMILY Protein kinase-like (PK-like) 95 427 IPR011009 -
Aed4g0920 498 MobiDBLite consensus disorder prediction 477 498 - -
Aed4g0920 498 ProSiteProfiles Protein kinase domain profile. 9 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0920 498 SMART pkinase_C_6 382 447 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aed4g0920 498 Gene3D Phosphorylase Kinase; domain 1 129 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0920 Aed-Chr4 8371417 8379324 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0920 13 453 AGC Kinase Gene Family AT2G19400 66.046 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Aed4g0920 Pkinase 1.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0920 K08790 - gmx:100811359 791.956