Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0912 ATGGAACCTCGCGTTGGGAATAAGTTTCGGCTTGGCCGCAAGATCGGTAGCGGATCGTTTGGAGAGATCTATTTAGGTACTAATATTCAAACTAATGAAGAGGTTGCAATTAAGCTTGAAAATGTCAAGACAAAGCATCCTCAGTTGCTATATGAGTCCAAGTTGTACAGAGTTCTCCAGGGAGGAACTGGAATTCCAGATGTTAGATGGTTTGGAGTGGAGGGAGATTACAATGTCCTAGTGATGGATCTGCTTGGACCCAGTCTTGAAGATCTATTTAACTTCTGTAGTAGAAAGCTGTCACTAAAGACGGTTCTCATGCTTGCTGATCAAATGATCAACCGTGTTGAGTTTGTTCATTCTAAATCATTTCTACATCGGGATATCAAACCAGATAATTTCCTCATGGGCTTGGGAAGGAGGGCAAACCAGGTTTACTGTATTGATTTTGGTTTGGCGAAGAAATATAGAGATAGTTCAACCCATCAACACATTCCTTACAGGGAAAATAAGAATTTAACCGGGACTGCTAGATATGCTAGTATGAATACCCACCTTGGCATTGAGCAAAGCCGAAGAGATGATTTGGAGTCTCTTGGTTATGTCTTGATGTATTTCTTGAGAGGAAGTCTCCCCTGGCAAGGACTTAAAGCAGGAACCAAGAAACAGAAGTACGAGAGAATCAGTGAAAAAAAGGTTTCTACCTCGATTGAGGCCTTGTGTCGAGGTTATCCAACAGAATTTGCATCATACTTCCATTACTGCCGCTCATTAAGGTTTGATGATAGGCCAGATTATGCTTACCTCAAAAGAATATTCCGTGACCTGTTTATTCGTGAAGGATTCCAGTTTGATTATGTGTTTGATTGGACAATCTTGAAGTATCAGCAATCACAGCTTGCCGCTCCTCCAGCACGTGCCGCAGGTCCTAATGCTGGAACTAGTTCTGCAATGCCACCAATTGTTAATGCTGATAGACAGACAGGAGAGGAAGGGCGACCTCCTGCTATGGTTTCAGGGGATTCCACAAGGCGAAAAATAATGTCAGGACCGATCTCAAACTCTGTAAATATTTCAAAGCAGAAAAATCCAATCACCACAGATGCTGCCCTTAGTAAGGAAGCCATGTTATCAAGGCCCAATGTCTTGGGCCAGTCAAGTGGAACCAGGCGTGGTGCTGTTTCTAGTATCCGTGATGCATTTGCTGGTTCCGATTTGGATCCCCGTACTCGTACCACTGAGGCTAACCCTGCAACAACGCGCAAAGCATCGTCTGGGAGACATGCTTCTTCTCATGCCAAGAACTATGAAACTGCAGTTAAGGGCATTGAAGGTTTGCAATTAGAGAATGATGAGAGGGCCCATCATTAA 1371 0.4354 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRVLQGGTGIPDVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYCIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYERISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDRPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLAAPPARAAGPNAGTSSAMPPIVNADRQTGEEGRPPAMVSGDSTRRKIMSGPISNSVNISKQKNPITTDAALSKEAMLSRPNVLGQSSGTRRGAVSSIRDAFAGSDLDPRTRTTEANPATTRKASSGRHASSHAKNYETAVKGIEGLQLENDERAHH 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0912 456 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Aed4g0912 456 MobiDBLite consensus disorder prediction 409 432 - -
Aed4g0912 456 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0912 456 MobiDBLite consensus disorder prediction 304 364 - -
Aed4g0912 456 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Aed4g0912 456 PANTHER CASEIN KINASE I-LIKE 1 431 - -
Aed4g0912 456 Pfam Protein kinase domain 10 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0912 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Aed4g0912 456 PANTHER CASEIN KINASE-RELATED 1 431 - -
Aed4g0912 456 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0912 456 Gene3D Transferase(Phosphotransferase) domain 1 1 318 - -
Aed4g0912 456 MobiDBLite consensus disorder prediction 346 364 - -
Aed4g0912 456 MobiDBLite consensus disorder prediction 399 456 - -
Aed4g0912 456 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0912 Aed-Chr4 8292310 8299053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0912 7 223 EF-hand Containing Proteins AT2G17890 25.333 1.95e-12 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Aed4g0912 Pkinase 2.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0912 K02218 - gmx:100786777 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0912 4 8292310 8299053 Aed4g0912 4 8292310 8299053 ECH
Aed6g2113 6 23633476 23638055 Aed4g0912 4 8292310 8299053 PCT