Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0900 ATGGCAGTCACATTGTACGACCCTAGCTCTGCCTCTGGGTTGAAGAAGCTTGATGAGTACCTTCTTCCACGCAGTTACATCACTGGGTACCAAGCTTCAAAGGATGATCTTACTGTTTATGCAGCTTTGCCAACTGCTCCATCACATCAATATTTTGTTATCTTTTTTGTACCAACAGTGGTGTTTCTGGTGAGGGATCTGGCTGACGATGACGACATGGATTTGTTTGGTGAAGAGACAGAAGAAGAGAAGAAGGCAGCTGAGGAACGGGCAGCCTCAGTGAAGGCATCTTCAAAAAAGAAAGAGTCTGGAAAATCATCTGTTCTGATGGATGTGAAACCATGGGATGATGAAACCGACATGAAGAAGCTTGAGGCAGTACCAAACTTGTTGCTGTTGGGTACGAATTTACAATGGTGGGGTTTGAGACCATGGCAACAGGATTGA 447 0.4497 MAVTLYDPSSASGLKKLDEYLLPRSYITGYQASKDDLTVYAALPTAPSHQYFVIFFVPTVVFLVRDLADDDDMDLFGEETEEEKKAAEERAASVKASSKKKESGKSSVLMDVKPWDDETDMKKLEAVPNLLLLGTNLQWWGLRPWQQD 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0900 148 Coils Coil 77 97 - -
Aed4g0900 148 MobiDBLite consensus disorder prediction 75 109 - -
Aed4g0900 148 PANTHER ELONGATION FACTOR 1-DELTA 1-RELATED 68 127 - -
Aed4g0900 148 PANTHER ELONGATION FACTOR 1-DELTA 1-RELATED 1 52 - -
Aed4g0900 148 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 1 52 - -
Aed4g0900 148 MobiDBLite consensus disorder prediction 79 109 - -
Aed4g0900 148 SUPERFAMILY eEF-1beta-like 102 127 IPR036219 -
Aed4g0900 148 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 69 77 IPR001326 GO:0003746|GO:0005853|GO:0006414
Aed4g0900 148 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 68 127 - -
Aed4g0900 148 Gene3D - 98 129 IPR014717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0900 Aed-Chr4 8177877 8179991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0900 9 141 Eukaryotic Initiation Factors Gene Family AT2G18110 51.163 1.39e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0900 K03232 - gmx:100499878 136.732