Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0889 ATGGCCAACCTAGGTTATACAGCTCCTGAATATGCTACTAGAGGAGAATTGTCTGAAAAGGCAGATATTTATAGTTTTGGTGTTCTCGTGCTTGAAATAATCTGTTGCAGGAAAAACACGGTGCATACTTTGCCAACAGAAATGCAGTACCTCCCAGAATATGCATGGAAACTGTACGAGAATGCAAGGATAATGGACATTGTGGATCCAAAGCTGCAACAACATGGATTGGTAGAAAAGGATGTGATGCAAGCAATCCACGTGGCATTCTTGTGTCTTCAGCCTCATGCACATTTGAGACCTCGCATGTCAGAAACAGTGGCAATGCTGACATTCAAAATAGAAATGGTTACAACACCAATGAGGCCAGCCTTCCTCCTGGATCGAAGGCCAAGAAAGAGTGAGGATGATGATGAGAACCATTCTTTGGAACCATTTGATTGA 444 0.4279 MANLGYTAPEYATRGELSEKADIYSFGVLVLEIICCRKNTVHTLPTEMQYLPEYAWKLYENARIMDIVDPKLQQHGLVEKDVMQAIHVAFLCLQPHAHLRPRMSETVAMLTFKIEMVTTPMRPAFLLDRRPRKSEDDDENHSLEPFD 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0889 147 MobiDBLite consensus disorder prediction 127 147 - -
Aed4g0889 147 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 124 - -
Aed4g0889 147 SUPERFAMILY Protein kinase-like (PK-like) 3 113 IPR011009 -
Aed4g0889 147 Pfam Protein tyrosine and serine/threonine kinase 4 107 IPR001245 GO:0004672|GO:0006468
Aed4g0889 147 Gene3D Transferase(Phosphotransferase) domain 1 1 120 - -
Aed4g0889 147 ProSiteProfiles Protein kinase domain profile. 1 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0889 147 PANTHER RECEPTOR-LIKE KINASE 4 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0889 Aed-Chr4 8060572 8063154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0889 2 128 Receptor kinase-like Gene Family AT1G56120 41.732 5.03e-29 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed4g0889 PK_Tyr_Ser-Thr 4e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0889 - - gmx:100791042 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2084 6 23451587 23453958 Aed4g0889 4 8060572 8063154 PCT