Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0853 ATGAGGTTGTGTGTATTTATTATAGTAACTCTTCTGTTTGGAATTGCGGAATTTGTGAAGGCTGAGATTTACATAGTCACGGTCGAGGGAGAACCTGTGATAAGTTACAAGGGAGGAATCGACGGCTTCGAAGCCACCGCCGTGGATTCTGATGACGAAGATGACGATGGTGATGATCGTGAAAAGCTTGATTCCACAAGTGAGGTGGTGGTTTCTTATGCTCGCCACCTTGAAAAGAGACACGACATGCTTCTGGGGATGCTATTTGAGCGTGGGACATACACCAAGCTCTATAGCTATAGACATCTTATAAATGGATTTGCAGTTCATATTTCCCCAGAACAGGCAGAAACTCTAAGACATGCTCCTGGGGTGAAATCTGTTGAGAGGGACTGGAAGGTGAAGAGGCTCACAACACATACCCCACAGTTTTTGGGGCTTCCAACTGGGGTGTGGCCAACAGGAGGTGGCTATGAGAGGGCTGGAGAAGACATTGTGATTGGGTTTGTGGACTCTGGGATCTACCCTCACCACCCAAGCTTTACTACTTACAATACTGAACCATATGGGCCAGTTTCTAGATATAGAGGAAAATGTGAAGTTGATCCTGACACTAAAAGAAGTTTCTGCAATGGGAAGATTATTGGAGCACAGCATTTTGCTCAAGCTGCAATAGCTGCTGGGGCGTTCAACCCTTCAATTGATTTTGATTCACCTCTGGATGGAGATGGGCATGGGAGTCATACAGCCTCTATTGCAGCTGGAAGAAATGGAATTCCTGTGAGGCTGCATGGACATGAATTTGGGAAAGCAAGTGGAATGGCTCCCCGTGCCAGGATTGCTGTGTACAAAGCACTCTATAGACTCTTTGGTGGATTTATTGCAGATGTAGTGGCTGCAATTGATCAGGCTGTGCATGATGGGGTGGATATACTCAGCCTTTCAGTTGGACCAAATAGTCCTCCATCAAACACCAAAACTACATTTTTGAACCCTTTTGATGCTACACTTCTTGGAGCAGTGAAAGCTGGTGTGTTTGTCGCACAGGCTGCAGGAAATGGTGGTCCTTTTCCCAAGTCATTAGTCTCATATAGTCCATGGATAGCATCTGTAGCAGCAGCAATTGATGATCGTAGATATAAAAACCATCTGATCCTCGGAAATGGAAAAATCTTAGCCGGACTTGGATTGTCACCTTCTACACGTTTAAACAAAACATACACATTGGTTTCTGCAACTGATGCGCTTCTAGATTCTTCAGTTACGAAGTACAGCCCCACTGATTGCCAGAGACCAGAAGTTTTAAATAAGAACTTAATAAAGGGAAATATTCTTCTCTGTGGCTATTCTTACAATTTTGTTGTTGGTTCTGCATCAATAAAGCAAGCCTCGGAAACAGCAAAGGCTCTTGGAGCAGTTGGTTTTGTTCTTTGTGTTGAAAATGTTTCTCCTGGATCAAAATTTGATCCGGTCCCTGTTGGCATTCCTGGGATTCTTATCACAGATGCCAGCAAATCAAAGGAACTGATAGATTATTATAATATCTCCACACGAAGAGACTGGACTGGGAGGGTGAAGACTTTCGAAGGTATTGGTAAAATTGAGGACGGTTTGATGCCTATTCTCCATAAATCTGCACCACAAGTAGCATTGTTTTCTGCTAGAGGACCAAATATAAAGGACTTTAGCTTCCAAGAGGCAGATCTTCTCAAACCAGATATATTAGCTCCGGGTTCATTGATTTGGGCTGCTTGGTCTCTAAATGGAACCGATGAGCCAAATTACGTTGGAGAGGGGTTTGCCATGATATCTGGGACTAGTATGGCTGCACCACATATAGCTGGAATTGCTGCTCTTATAAAGCAGAAACATCCACATTGGAGCCCTGCTGCCATTAAATCAGCCTTGATGACAACAGCAACAACTCTAGACAGAGCAGGAAATCCTATTCTAGCACAGCAATATTCTGAATCAGAAGCTATGAAGCTGGTCAGAGCCACTCCTTTTGATTATGGTAGTGGACACATAAAGAACTACACAAACTCCCCATGCAACAACATCACCATGGGCCACCCATCAAATCTAAACACCCCATCCATCACAATCTCCCATCTTGTAAGAACTCAAATCGTCACACGCACCGTCACAAATGTCGCCGATGAGGAAGAAACCTATGTGATCACAGCCAGGATGCAACCAGCAGTCGCCATTGACGTGAACCCTCCAGCAATGACCCTTAGAGCAGGTGCATCACGCAGGTTCACCGTGTCACTCACTGTTCGCTCAGTCACAGGAACCTATAGTTTTGGAGAGGTGTTGATGAAGGGAAGCAGAGGGCACAAGGTGAGGATCCCTGTTCTTGCCAATGGATATTCAAGATAG 2382 0.4471 MRLCVFIIVTLLFGIAEFVKAEIYIVTVEGEPVISYKGGIDGFEATAVDSDDEDDDGDDREKLDSTSEVVVSYARHLEKRHDMLLGMLFERGTYTKLYSYRHLINGFAVHISPEQAETLRHAPGVKSVERDWKVKRLTTHTPQFLGLPTGVWPTGGGYERAGEDIVIGFVDSGIYPHHPSFTTYNTEPYGPVSRYRGKCEVDPDTKRSFCNGKIIGAQHFAQAAIAAGAFNPSIDFDSPLDGDGHGSHTASIAAGRNGIPVRLHGHEFGKASGMAPRARIAVYKALYRLFGGFIADVVAAIDQAVHDGVDILSLSVGPNSPPSNTKTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKSLVSYSPWIASVAAAIDDRRYKNHLILGNGKILAGLGLSPSTRLNKTYTLVSATDALLDSSVTKYSPTDCQRPEVLNKNLIKGNILLCGYSYNFVVGSASIKQASETAKALGAVGFVLCVENVSPGSKFDPVPVGIPGILITDASKSKELIDYYNISTRRDWTGRVKTFEGIGKIEDGLMPILHKSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWAAWSLNGTDEPNYVGEGFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTATTLDRAGNPILAQQYSESEAMKLVRATPFDYGSGHIKNYTNSPCNNITMGHPSNLNTPSITISHLVRTQIVTRTVTNVADEEETYVITARMQPAVAIDVNPPAMTLRAGASRRFTVSLTVRSVTGTYSFGEVLMKGSRGHKVRIPVLANGYSR 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0853 793 Gene3D - 689 790 - -
Aed4g0853 793 SUPERFAMILY Protease propeptides/inhibitors 86 134 - -
Aed4g0853 793 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 167 178 IPR023827 -
Aed4g0853 793 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 136 IPR037045 -
Aed4g0853 793 Gene3D Peptidase S8/S53 domain 164 677 IPR036852 GO:0004252|GO:0006508
Aed4g0853 793 ProSiteProfiles Serine proteases, subtilase domain profile. 131 683 - -
Aed4g0853 793 PRINTS Subtilisin serine protease family (S8) signature 241 254 IPR015500 -
Aed4g0853 793 PRINTS Subtilisin serine protease family (S8) signature 604 620 IPR015500 -
Aed4g0853 793 PRINTS Subtilisin serine protease family (S8) signature 162 181 IPR015500 -
Aed4g0853 793 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 676 792 IPR045051 -
Aed4g0853 793 ProSitePatterns Serine proteases, subtilase family, serine active site. 605 615 IPR023828 -
Aed4g0853 793 CDD PA_subtilisin_like 384 522 - -
Aed4g0853 793 PANTHER CUCUMISIN-RELATED 14 676 - -
Aed4g0853 793 PANTHER CUCUMISIN-RELATED 676 792 - -
Aed4g0853 793 CDD Peptidases_S8_3 138 641 IPR034197 -
Aed4g0853 793 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 676 IPR045051 -
Aed4g0853 793 Pfam Subtilase family 162 647 IPR000209 GO:0006508|GO:0008236
Aed4g0853 793 Pfam Peptidase inhibitor I9 24 135 IPR010259 -
Aed4g0853 793 Pfam Fibronectin type-III domain 694 787 IPR041469 -
Aed4g0853 793 Gene3D - 377 542 - -
Aed4g0853 793 SUPERFAMILY Subtilisin-like 137 677 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0853 Aed-Chr4 7626460 7632112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0853 9 793 Subtilisin-like Serine Gene Family AT4G30020 75.000 0.0 1253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0853 - - gmx:100784999 1458.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0853 4 7626460 7632112 Aed4g0853 4 7626460 7632112 ECH
Aed6g2050 6 23233656 23244847 Aed4g0853 4 7626460 7632112 PCT