Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0829 ATGGAAGCTCCTATTCCTAGCTTCTTTGTGGTCTTATCATCATTTCTGCTTCTAATAGTAAGTACACAAACAAGCTCAGCTCAACTTACTCGAGGCTTCTATAGATATACATGTCCCAATGTGGAACAGTTGGTTCGTTCAGCTGTGGAGCAGAAGTTTCAGCAGACCTTTGTCACTGCCCCTGCCACTCTTAGACTCTTCTTCCATGATTGCTTTGTGAGGGGTTGTGATGCTTCCATTTTGCTTGCATCTCCAAACGACAAGGCAGAGAAAAATCACCCTGATGACATTTCACTAGCTGGGGATGGCTTTGACACAGTGGCTAAAGCTAAGGCAACTGTTGATAGTGTCACTCAATGCAGAAACAAAGTCTCTTGTGCTGATATACTTGCTCTGGCTACCAGAGATGCTGGGGGACCATTTTATGAAGTTGAGTTAGGAAGGCGTGATGGGAGAATATCTACTATTTCCAGTGTTCAACGCCAGCTTCCTCACCCTGATTTCAGTTTAGATAAGCTCAATTCCATGTTTAGCTTCCATGGCCTCACACAGACAGATATGATTGCCTTATCAGGATTCTCTCACTGCAACCACTTTTCAAAACGGATCTACAACTTCAGCCCTAAAAACCTAATTGACCCAACACTGAACTTAGAATATGCCTTCCAACTTAGACAGGCTTGCCCTCTAAGAGTTGACTCAAGAATAGCCATAAACATGGATCCTGTCACACCTCAAAAGTTTGACAACCAATACTTCAGGAATCTCCAGCAAGGAAAGGGCCTATTCACTTCTGATCAGGTGCTGGCCACAGATGAAAGGTCAAGGGTCACAGTCGACTTGTTTGCATCAAATGAACAAGCTTTTAACAATGCTTTTATTGAAGCTATTACTAAGATGGGAAGATTAGGTGTTAAAACAGGAAGACAAGGGGAAATAAGGTTTGATTGCTCCAGGGTGAACTAA 966 0.4296 MEAPIPSFFVVLSSFLLLIVSTQTSSAQLTRGFYRYTCPNVEQLVRSAVEQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPNDKAEKNHPDDISLAGDGFDTVAKAKATVDSVTQCRNKVSCADILALATRDAGGPFYEVELGRRDGRISTISSVQRQLPHPDFSLDKLNSMFSFHGLTQTDMIALSGFSHCNHFSKRIYNFSPKNLIDPTLNLEYAFQLRQACPLRVDSRIAINMDPVTPQKFDNQYFRNLQQGKGLFTSDQVLATDERSRVTVDLFASNEQAFNNAFIEAITKMGRLGVKTGRQGEIRFDCSRVN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0829 321 Gene3D - 32 321 - -
Aed4g0829 321 PANTHER PEROXIDASE 16-RELATED 12 321 - -
Aed4g0829 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g0829 321 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g0829 321 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g0829 321 PANTHER - 12 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0829 321 CDD secretory_peroxidase 28 320 IPR033905 GO:0004601|GO:0042744
Aed4g0829 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0829 321 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0829 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0829 321 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0829 321 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0829 321 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0829 321 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0829 321 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0829 321 Pfam Peroxidase 45 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g0829 321 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Aed4g0829 321 ProSiteProfiles Plant heme peroxidase family profile. 28 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g0829 321 Gene3D Peroxidase, domain 2 164 300 - -
Aed4g0829 321 SUPERFAMILY Heme-dependent peroxidases 28 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0829 Aed-Chr4 7179924 7182633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0829 16 321 Peroxidase AT2G18980 71.746 2.22e-162 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0829 K00430 - gmx:100808542 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2036 6 23129739 23130881 Aed4g0829 4 7179924 7182633 PCT