Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0824 ATGGAGGGTCAACCTGCTAAGAGGAGACGTGTGTACTCACTTGAACCAAAGAAAGTGGAAGAAGCAGCGTTTGCAAGAAACTACACGAACTACTTGGTGCCAGCATTGATGAAGATCAAGGAAAGAAGAAGAAGAAGAAGCACTACTTCATCATCACAACAACATAGTACTGTCAATTGTGATGATGATGATGACATTCAGAATGTTGTCAAGTATGAAGTGGACATGGCAATGGCGTACTCAGCTCAAGGCTATGCATGGAGCAATGCTCTAAGTAAAAAGCTTCAAAGGGACAACAATAAGGCCAATGTAGATAACCCTTGTGGCCAAAATTGTGAAATGGTACCAATATTGGATAGTAATTTCTCTTCAAACCCTAGTTTGATTAAGTCTGATAATAAGTGCAAGGAGATTTCTGAAATGAAAAGGGGTTCAAGAGAAGATTATGAAGATGAAGATGAAGTTATGATGAATAATGGCCAGTTGAAGAGCCTAAGAAGGTTGATACCTGGTGGAGAAGAGATGTGTAGTGAACAAATGGTGACTGAGCTACAAAGCTATGTAAGCTGTTTGCAAATGCAGGTGAACATTCTTCAGTGCCTCGCTGAGACACATTGA 618 0.4029 MEGQPAKRRRVYSLEPKKVEEAAFARNYTNYLVPALMKIKERRRRRSTTSSSQQHSTVNCDDDDDIQNVVKYEVDMAMAYSAQGYAWSNALSKKLQRDNNKANVDNPCGQNCEMVPILDSNFSSNPSLIKSDNKCKEISEMKRGSREDYEDEDEVMMNNGQLKSLRRLIPGGEEMCSEQMVTELQSYVSCLQMQVNILQCLAETH 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0824 205 CDD bHLH_AtIBH1_like 145 202 IPR044549 GO:0006355
Aed4g0824 205 PANTHER TRANSCRIPTION FACTOR BHLH146 3 204 - -
Aed4g0824 205 MobiDBLite consensus disorder prediction 41 62 - -
Aed4g0824 205 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 204 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0824 Aed-Chr4 7133006 7133623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0824 7 203 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 30.457 5.90e-22 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0824 - - gmx:100527269 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2033 6 23115706 23116296 Aed4g0824 4 7133006 7133623 PCT