Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0794 ATGGAGGAGCAAGACAAAGAGAAAGGATCAGAGGAAGAAGTGATAAAGTACTGTGGTGTGAGAAGAAGGCCATGGGGTAAGTTTGGAGTAGAGATCAGAGATTCAACGAAACCTACGGGAAGACAATGGTTAGGAACATTTGATACTGCTGAAGAAGCTGCTAGAGCTTATGATCGTGCTGCCATTGGTTTGAAGGGTGCTCTTGCAATTCTTAATTTTCCTCATGAGTACTATTCTCATCTCCCTTTTGTTGTGTCATCATCACCAAACCTGACTTTTACTATGGAAAATGATGATGGATGTTCTTTTGCTGCAAAAAGAAAGGAAGTTATAGAGTTTGAGTGTTTGGATAATAAGGTGTTGGAAGAGCTTCTCGAGTCAGAAGAAGAGAAGAGATAG 399 0.406 MEEQDKEKGSEEEVIKYCGVRRRPWGKFGVEIRDSTKPTGRQWLGTFDTAEEAARAYDRAAIGLKGALAILNFPHEYYSHLPFVVSSSPNLTFTMENDDGCSFAAKRKEVIEFECLDNKVLEELLESEEEKR 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0794 132 PANTHER ETHYLENE RESPONSE FACTOR 1 128 - -
Aed4g0794 132 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Aed4g0794 132 PANTHER DNA-BINDING DOMAIN 1 128 IPR044808 GO:0003700|GO:0009873
Aed4g0794 132 Gene3D AP2/ERF domain 15 75 IPR036955 GO:0003700|GO:0006355
Aed4g0794 132 SUPERFAMILY DNA-binding domain 16 76 IPR016177 GO:0003677
Aed4g0794 132 CDD AP2 16 75 IPR001471 GO:0003700|GO:0006355
Aed4g0794 132 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Aed4g0794 132 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Aed4g0794 132 Pfam AP2 domain 16 65 IPR001471 GO:0003700|GO:0006355
Aed4g0794 132 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0794 Aed-Chr4 6652789 6653187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0794 11 132 AP2-EREBP Transcription Factor Family AT3G23230 52.381 8.14e-38 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aed4g0794 AP2 1.9e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0794 - - gmx:100796977 163.31