Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0792 ATGGAGGGGCAAGAGAAAGAGAAATTAGGAGGGGAAGAAGTGATAAAGTACCGTGGTGTGAGAAGAAGGCCATGGGGTAAGTTCGGAGCAGAGATCAGAGACACAACGAAACCTAAGGGAAGACAATGGTTAGGGACATTTGACACTGCTGAAGAAGCTGCTAGAGCTTATGATCGTGCTGCCATTGAATTGAGGGGTGCTCTTGCTATTCTTAATTTTCCTGATGAGTGTTATTCTCGTATCCCTTTTGTGTTATCATCATCAAACCTAGCTTCTACCAAGGATAATGTTGGAACTTCTTGTTGTGCTCCACCACAACCACAGAAGGAAGTTATTGAGTTCGAGTGTTTGGATAACAAGAGGTTGGGTATTCGAAAACTTCGTTTTCCCAATGTGATGATGGAAAATAACTAA 414 0.4251 MEGQEKEKLGGEEVIKYRGVRRRPWGKFGAEIRDTTKPKGRQWLGTFDTAEEAARAYDRAAIELRGALAILNFPDECYSRIPFVLSSSNLASTKDNVGTSCCAPPQPQKEVIEFECLDNKRLGIRKLRFPNVMMENN 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0792 137 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Aed4g0792 137 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Aed4g0792 137 PANTHER ETHYLENE RESPONSE FACTOR 1 122 - -
Aed4g0792 137 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Aed4g0792 137 PANTHER DNA-BINDING DOMAIN 1 122 IPR044808 GO:0003700|GO:0009873
Aed4g0792 137 Pfam AP2 domain 16 66 IPR001471 GO:0003700|GO:0006355
Aed4g0792 137 CDD AP2 16 75 IPR001471 GO:0003700|GO:0006355
Aed4g0792 137 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Aed4g0792 137 Gene3D AP2/ERF domain 15 75 IPR036955 GO:0003700|GO:0006355
Aed4g0792 137 SUPERFAMILY DNA-binding domain 16 76 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0792 Aed-Chr4 6631543 6632740 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0792 16 122 AP2-EREBP Transcription Factor Family AT3G23230 57.018 8.22e-34 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aed4g0792 AP2 1.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0792 - - gmx:100801981 158.688