Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0788 ATGGTGAGAGACATGATGGGCACATACTCATCATCAGGAGGGTGTGGTGGGGGAGACATGAATGAGAAACCTGCATGGCTAGAGAGGCTTATGGCTGAGACATTCTTTGGTGGTTGTGGGGTCCACCAGGATCGCAGGAAGAACGAGAAGAACGTCTTTTGCTTGCACTGTTGCCTTAGCATCTGCCCCCACTGCCTCTCTTCCCACCGCCAACACCCTCTCCTCCAGGTGCGAAGGTATGTTTACCACGACGTGATTCGGTTAGATGATCTGGAAAAACTCATTGATTGCTCCAATATTCAGCCCTATACTATAAACAGTGCCAAAGTAATATTCTTAAATCAGAGGCCACAATCAAGGACATGCAAAGGCCCTGCAAACGCTTGCTTCACTTGTGACAGGATTCTTCAGGAGCCATTTCATTTCTGTTCTCTATCATGCAAGGTTGATTACATGGTGTACGCGGGCCAAAGCTTGGGCAGCATTTTACATCGATTCGATGAATCTGATTTCGCAATTTCGCAGTTCGAGGGTCTAAGAGTGGATGGCTCAGAGGTAATTGACGAAGATACCCAAATTGCCCCTAGTTCCTCATATTCCAACACTGAGGCCACCAGCAATTCCGTAATTTCACGCGAACCTAATAATAACGTGAACGTGAAGAAGGGCAAAACCAGCAGGTTCCTCCCTGGGATCGTCCTCTCCCTTGGCAGCAGAAGAAAGGGTGCCCCTCAGAGGGCCCCACTCTCCTAA 753 0.4874 MVRDMMGTYSSSGGCGGGDMNEKPAWLERLMAETFFGGCGVHQDRRKNEKNVFCLHCCLSICPHCLSSHRQHPLLQVRRYVYHDVIRLDDLEKLIDCSNIQPYTINSAKVIFLNQRPQSRTCKGPANACFTCDRILQEPFHFCSLSCKVDYMVYAGQSLGSILHRFDESDFAISQFEGLRVDGSEVIDEDTQIAPSSSYSNTEATSNSVISREPNNNVNVKKGKTSRFLPGIVLSLGSRRKGAPQRAPLS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0788 250 PANTHER - 24 250 - -
Aed4g0788 250 MobiDBLite consensus disorder prediction 195 221 - -
Aed4g0788 250 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Aed4g0788 250 Pfam PLATZ transcription factor 78 149 IPR006734 -
Aed4g0788 250 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 24 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0788 Aed-Chr4 6594333 6599791 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Aed4g0788 PLATZ 1.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0788 - - gmx:100806234 470.7