Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0787 ATGCATTTCGTACTAACGTTCAATGCTCCAAAAGTTCATGCACCACCATCTCCAATAATTTCCACAGAGCTATCCCTAGCTTCAACCACTTTCCAAAGCCAAAGCAAGAAGAAGAAAACCTGCATTAGCAACAATGAGAAGCAGTTGTCGTGGGGCTGTTTGACATCGCTGGAGCTCTACAGCGACCCTTGGAAGATTAAGAAAGTGTTGACGAAGAGCGATGTCGGGAGGCTGAACCGGCTCTTGCTCCGGGCGGATGTGGTGGAGAACCTTATGTTGCCGGTGCTAGGCACGGATGCTGAAAGAGATGCGAAGAGCGGAATGGGAGCCCCGGTGAGTGTGTGGGATGTGGACACCATGTCCATGCACAGCCTCGTTCTCAAGCGCTGGGCCTCTTTCCAGAACTTTGTCCTCCTTGGAGGGTGGAGCCCTAACTTTGTCAGGAGGAGGGAGTTGAAGAAAGGAGATGAAGTTGGGTTTCTTTGGGATTCTTATTCACACTGCTTTCACTTCAAGCTTTTTAAATGA 528 0.4962 MHFVLTFNAPKVHAPPSPIISTELSLASTTFQSQSKKKKTCISNNEKQLSWGCLTSLELYSDPWKIKKVLTKSDVGRLNRLLLRADVVENLMLPVLGTDAERDAKSGMGAPVSVWDVDTMSMHSLVLKRWASFQNFVLLGGWSPNFVRRRELKKGDEVGFLWDSYSHCFHFKLFK 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0787 175 SUPERFAMILY DNA-binding pseudobarrel domain 61 172 IPR015300 -
Aed4g0787 175 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 28 173 - -
Aed4g0787 175 CDD B3_DNA 64 175 IPR003340 GO:0003677
Aed4g0787 175 Gene3D - 63 172 IPR015300 -
Aed4g0787 175 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 28 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0787 Aed-Chr4 6579324 6579851 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0787 48 160 RAV Transcription Factor Family AT1G50680 29.167 1.30e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0787 - - lang:109344782 218.009