Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0761 ATGGCTTCTTCTATTCCTCTTTACCAACCAACCAACACCTTATTCTCCAACAACACACAGTTCAAGTCTTCGCGCCGCCGTGGCTTCTTGTGGCGACCACCCAGTTACTCGTTCGGCTCCAATCCTGAAAACAAAGCACGACCCGTCAGAGCTTCGGTTGCTGCACCCCCATTTCCCCTGTTTCAGCCTCCCCAAGTTGAAGAGGCATCGTCTGAGTTGGAGCCCGTGGATCCTGATTTCTACAAGATCGGTTATGTCCGAAGTGTGCGAGCTTATGGAGTTCAGTTTAAAGAAGGGCCAAATGGTTTTGGTGTGTACGCTTCCAAAGATGTAGAGCCTCTTCGCCGAGCAAGGGTTATAATGGAAATTCCTCTTGAACTGATGTTAACCATAAGCAAGAAGCTCCCGTGGATGTTTTTCCCTGATATAATTCCCTTGGATCATCCAATATTTGATATTATAAACTCGACAAATCCAGAGACAGATTGGGACCTAAGGTTAGCATGCCTTCTCTTATATGCATTTGACTGTGAAGGCAACTTCTGGCAATTGTATGGCGACTTCTTACCAAGTGAAGATGAGTGCACTAGCTTACTTTTAGCTTCAGAGGAGGAACTTTTGGAGCTGCAGGATCTCGATCTTGCTTCCACTATTAGAAATCAGCAACTGCGAGCCTTAGAATTCTGGGAGTATAACTGGCACAGTTCTGCACCCCTTAAAATAAAGCGTCTTGCGCGTGATCCTCAAAGGTTTGCTTGGGCAGTAGGTATTGCACAGTCACGATGTATTAACATGCAGACGAGAATTGGTGCTCTAAATCAAGAAACAAATATGCTGATTCCTTATGCTGATATGCTGAACCATTCATTTGAGCCAAATTGTTTTTTCCATTGGCGTTTTAAGGACAGGATGCTTGAGGTTCTTATAAATGCTGGACAGCGCATTAGAAAGGGAGATGAGATGACAGTTAATTACATGAGTGCACAGAAGAATGACATGTTCTTGCAAAGATATGGGTTTTCATCACCTGTGAATCCTTGGGACGAGATCAAATTCTCAGGCAATGCACGTATTCATTTGGATTCCTTCTTGTCAATCTTCAATATATCTGGCCTTCCTGGAGAGTATTACCATAACAATTGTCTGTCAAATGCCGGAGATAGATTTGTTGATGGAGCAGTCATAGCTGCAGCACGAACATTGCCAACTTGGTCAGACGGGGATGTGCCTCCAATCCCTAGCGCAGAAAGAAAGGCTGCGAAGGAGTTGCAAGATGAATGTCAAAAGATGCTTGCAGAATTTGCTACAAGCTCTAAGCAAGACCAAAAATTGCTAGATTCAATGACAGATGCTACGAGGACTCTTGAAGCTGCAATAAAGTATAGATTGCACAGGAAATTGTTCATGGAGAAAGTTATCCAAGCATTGGAGCTGTATCAAGAGCAAATACTGTTTTGA 1458 0.4369 MASSIPLYQPTNTLFSNNTQFKSSRRRGFLWRPPSYSFGSNPENKARPVRASVAAPPFPLFQPPQVEEASSELEPVDPDFYKIGYVRSVRAYGVQFKEGPNGFGVYASKDVEPLRRARVIMEIPLELMLTISKKLPWMFFPDIIPLDHPIFDIINSTNPETDWDLRLACLLLYAFDCEGNFWQLYGDFLPSEDECTSLLLASEEELLELQDLDLASTIRNQQLRALEFWEYNWHSSAPLKIKRLARDPQRFAWAVGIAQSRCINMQTRIGALNQETNMLIPYADMLNHSFEPNCFFHWRFKDRMLEVLINAGQRIRKGDEMTVNYMSAQKNDMFLQRYGFSSPVNPWDEIKFSGNARIHLDSFLSIFNISGLPGEYYHNNCLSNAGDRFVDGAVIAAARTLPTWSDGDVPPIPSAERKAAKELQDECQKMLAEFATSSKQDQKLLDSMTDATRTLEAAIKYRLHRKLFMEKVIQALELYQEQILF 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0761 485 Pfam Rubisco LSMT substrate-binding 415 466 IPR015353 -
Aed4g0761 485 Gene3D set domain protein methyltransferase, domain 1 86 340 - -
Aed4g0761 485 SUPERFAMILY SET domain 101 341 IPR046341 -
Aed4g0761 485 Gene3D - 383 483 IPR036464 -
Aed4g0761 485 Coils Coil 420 440 - -
Aed4g0761 485 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 54 477 - -
Aed4g0761 485 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 337 477 IPR036464 -
Aed4g0761 485 CDD SET_LSMT 93 340 - -
Aed4g0761 485 Pfam SET domain 102 325 IPR001214 GO:0005515
Aed4g0761 485 ProSiteProfiles SET domain profile. 81 326 IPR001214 GO:0005515
Aed4g0761 485 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 14 54 477 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aed4g0761 SET 1.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0761 - - gmx:100786962 875.544