Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0748 ATGAAAGAAGAAACAATGAGGATTATTTCAACGCTTGAAATTGTGTTGTTGTTCTTGTGTTTTTCTTATTATGCACCACTCTTTTGTGATGGCAATGATGAGAGCACTACTATGAGAGTGCTTTTGGAGGTGAAATCATCGTTCACTCAAGACCCAGAAAACGTTCTAAGTGATTGGTCAGAGAACAACGCCGATTACTGTAGTTGGAGAGGGGTGTCATGTGACTCGTTGCACCAAGTGGTGGGACTCAACCTGTCCGACTCATCACTCAGTGGGTCAATATCACCCTCACTCGGCCGTTTGCAAAACCTAATCAACCTCGATCTCTCTTCTAACAGCCTCAGTGGTCCCATTCTACCAACCCTCTCCAACCTCACTTCATTGGAATCTCTCATACTCCACTCTAATCAACTCACGGGTCAAATCCCCACCGAGTTCGACTCGCTGCAGAGTCTCCGAGTCTTGCGAATCGGTAACAACGAACTCACTGGCCCGATTCCCGCGTCACTTGGGTACATGCCCGGCCTTGAGTACATTGGCTTAGCCTCATGCAGACTCACCGGTCCGATTCCGCCCGAACTCGGTCGACTCAGTCAGTTGCAGTCTCTGATTCTGCAGCAAAACGAGTTGACGGGGCCGATTCCGCCCGAGTTGGGGTACTGCTGGAGCCTCCAAACCTTCTCCGCCGCTGGCAACAGCCTTAATGGCTCGATCCCGAGTAAGCTGAGTCGACTCGATAAACTCCAAATTCTCAACCTTGGCGATAACAGATTAACCGGGTCGATTCCGAGTCAACTCGGCGAGCTGAGTGCACTTCGATACCTGAATTTCATGGGGAACAAACTCGAGGGTCGTATTCCACCGTCGTTGGCTAAATTGGGTAACCTTCAAAATCTCGACTTGTCAAGTAATATGCTCAGTGGGGAAATTCCAGAGAAGTTATGGAACATGGGTGTGTTAAAATACTTAGTTCTCGCAGGGAACACGCTCTCTGGGACCATTCCAAGAACCATATGTTCCAATGCAACAAGTTTGATGAATTTGTTGATGTCGGATACTGGAATCCATGGTGAGATACCAGCTGAGTTGGGACAGTGCCAATCACTGAAACAACTTGATTTGTCAAACAATACTCTCAATGGGTCAATACCTATTGAGGTTTATGGGTTGTTGGGGCTAACAGATCTATTGCTTCACAACAACACTTTGGTTGGTTCAATCTCTCCCTTCATAGGGAATCTCACTAACTTGCAATCACTTGCATTGTATCACAACAATTTGCAGGGTGGTCTCCCCACAGAGATTGGGAAACTTGGGAAATTGGAGATAATGTTTCTCTATGATAACATGTTGTCAGGGAAGATTCCTTTGGAGATTGGAAACTGCGTAAGCTTGCAAATGGTTGATTTGTTTGGAAACCGTTTCAGTGGGGAAATTCCCTTCACTATTGGGAGGCTGAAAGAGCTGAATTTCTTGCACCTTAGGCGGAATGGGCTTGTTGGTGAGATTCCTTCCACACTTGGGAACTGTCAAAAACTTACTGCGCTTGATTTGGCAGATAATCATCTCTCAGGTGAAATTCCTTCAACATTTGGATTCCTCAGTGAGTTGAAGCTGTTCATGCTCTACAACAATTCTCTTCAAGGTAGTATTCCTCAACAACTTGTAAATTTAGCAAACCTGACCAGAGTGAATCTTTCAAACAACACACTGAATAGTAGTTTGGATGCATTGTGTAGCTCTAGGTCTTTACTTTCATTTGATGTCACAGATAATGAGTTTGATGGTGAGGTACCTTTTATCCTTGGAAATTCACCTTCCCTTGATAGACTGAGATTGGGTAACAACAAATTCTCTGGTGAAATTCCAAGGACTTTGGGTAAAATCACTATGCTATCATTGTTAGACCTCTCAGGAAATTCACTCACAGGACCAATACCAGATGAGCTTTCTTTGTGTAAAAACCTGACTCACATTGATTTGAACAATAACCTTCTATCTGGCCACATACCATCATGGCTTGGAAATTTGCCTCAGTTGGGAGAGGTTAAGCTCTCCACCAATCAATTTTCAGGGCCTGTTCCACTAGGCCTATTCAAAAAGCCCAAGTTGCTGGTTCTTTCCTTGAGTAACAATTCTCTTAACGGAAGTCTCCCAGATGATATTGGTGATCTTGCATCTCTTGGTATCCTCAGGCTTGACCATAACAATTTCTCTGGACCAATCCCTCGTGAAATTGGTAAATTGAGCAATCTTCTTGAGCTGAAGCTATCCAGGAATGGCTTTAGTGGGGAAATACCATTTGAGATTGGAAGTCTAGAAAATCTCCAAATCGCTTTGGACCTCAGTTACAATAATCTCTCTGATCATATCCCATCTACACTTGGCATGCTGTCGAAATTGGAAGTACTTGATCTTTCTCACAATCAACTCTCTGGAGAAGTTCCTTCCATAGTTGGTGAAATGAGGAGCTTGGGGAAGCTTGACATCTCTTATAATAACCTTCAAGGCGCATTGGATAAGGATTTTTCCCGCTGGCAACACGAGGCGTTCGAAGGGAACCTTCATCTTTGTGGAGCCTCTCTTGGAACCTGCAACCGTGGTGGCAATAAGCGAATACTCTTAAGCAGCAAATCAGTGGCTATAGTCTCTGCACTTTCAACTTTAGCTGCAATTGCTCTACTAGTACTTATAGTGGTCATCTTCTTGAAAACCAAGCAAGAGTTTCTGAGGAGAGGGAGTGAATTGAGTTTTGTATTCTCCTCCTCATCGCGAGCACAAAAGCAGTCGTTGATGCCTCTAATCGCACCAGGAAAGCGGGATTTCAGGTGGGAAGACATCATGGATGCCACAAACAATCTGAGTGATGAGTTCATAATTGGCTGTGGAGGTTCCGGGACAGTGTACAGAGTCAAACTCCCCACCGGAGAGACTCTGGCTGTCAAGAAGATTTCATGGAAGGACGATTATCTGTTGCACAAAAGCTTTATAAGAGAACTCAAGACTTTAGGGGGGATCAAGCATAGGCATCTGGTGAAACTCATAGGTTGTTGTAGCAATAGACTTCATGGAGGAGGTTGGAATCTGTTGATATATGAGTACATGGAGAATGGTAGTGTTTGGGATTGTCTTCATGGGGAACCCCTCAAGTTAAAGGGGAGACTTGATTGGGACACAAGATTCAGAATTGCTGTGGGATTAGCTCATGGAGTGGAGTACCTCCATCATGATTGTGTACCAAAGATTCTTCACAGGGACATCAAATCCAGCAACATATTGCTAGATTCCAACATGGAGGCACACTTGGGAGACTTTGGTCTGGCAAAAGCACTCATTGAGAATCATGAATCGATCACTGAGTCCAATTCTTGTTTTGCCGGGTCTTATGGTTACATAGCACCAGAGTATGCATACTCAATGAAGGCCACAGAGAAAAGTGATGTGTACAGCATGGGAATTGTGCTGATGGAACTTGTTACCGGCAAAACGCCAACCAGTGCAGCTTTCAGAGCAGACATGGACATGGTGAGATGGGTGGAGATGCACCTTGACATGCAAGGCACTGCTGATGAGGAAGTGATAGATCCAAAGCTGAATTGCCTTTTGCCTGATGAAGAGTTTGCTGCATTCCAGGTTCTTGAGATAGCCATACAGTGCACAAAAACTGCACCACAAGAGAGGCCAACGGCACGGCATGTGTGTGATCTTCTTCTGCATGTGTCCAACAACAAGAAGGTGGAGTTTGAGAAGACGAATCTGGATCATTGCTAG 3771 0.4476 MKEETMRIISTLEIVLLFLCFSYYAPLFCDGNDESTTMRVLLEVKSSFTQDPENVLSDWSENNADYCSWRGVSCDSLHQVVGLNLSDSSLSGSISPSLGRLQNLINLDLSSNSLSGPILPTLSNLTSLESLILHSNQLTGQIPTEFDSLQSLRVLRIGNNELTGPIPASLGYMPGLEYIGLASCRLTGPIPPELGRLSQLQSLILQQNELTGPIPPELGYCWSLQTFSAAGNSLNGSIPSKLSRLDKLQILNLGDNRLTGSIPSQLGELSALRYLNFMGNKLEGRIPPSLAKLGNLQNLDLSSNMLSGEIPEKLWNMGVLKYLVLAGNTLSGTIPRTICSNATSLMNLLMSDTGIHGEIPAELGQCQSLKQLDLSNNTLNGSIPIEVYGLLGLTDLLLHNNTLVGSISPFIGNLTNLQSLALYHNNLQGGLPTEIGKLGKLEIMFLYDNMLSGKIPLEIGNCVSLQMVDLFGNRFSGEIPFTIGRLKELNFLHLRRNGLVGEIPSTLGNCQKLTALDLADNHLSGEIPSTFGFLSELKLFMLYNNSLQGSIPQQLVNLANLTRVNLSNNTLNSSLDALCSSRSLLSFDVTDNEFDGEVPFILGNSPSLDRLRLGNNKFSGEIPRTLGKITMLSLLDLSGNSLTGPIPDELSLCKNLTHIDLNNNLLSGHIPSWLGNLPQLGEVKLSTNQFSGPVPLGLFKKPKLLVLSLSNNSLNGSLPDDIGDLASLGILRLDHNNFSGPIPREIGKLSNLLELKLSRNGFSGEIPFEIGSLENLQIALDLSYNNLSDHIPSTLGMLSKLEVLDLSHNQLSGEVPSIVGEMRSLGKLDISYNNLQGALDKDFSRWQHEAFEGNLHLCGASLGTCNRGGNKRILLSSKSVAIVSALSTLAAIALLVLIVVIFLKTKQEFLRRGSELSFVFSSSSRAQKQSLMPLIAPGKRDFRWEDIMDATNNLSDEFIIGCGGSGTVYRVKLPTGETLAVKKISWKDDYLLHKSFIRELKTLGGIKHRHLVKLIGCCSNRLHGGGWNLLIYEYMENGSVWDCLHGEPLKLKGRLDWDTRFRIAVGLAHGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALIENHESITESNSCFAGSYGYIAPEYAYSMKATEKSDVYSMGIVLMELVTGKTPTSAAFRADMDMVRWVEMHLDMQGTADEEVIDPKLNCLLPDEEFAAFQVLEIAIQCTKTAPQERPTARHVCDLLLHVSNNKKVEFEKTNLDHC 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0748 1256 Gene3D Ribonuclease Inhibitor 184 279 IPR032675 -
Aed4g0748 1256 Gene3D Ribonuclease Inhibitor 35 183 IPR032675 -
Aed4g0748 1256 PRINTS Leucine-rich repeat signature 369 382 - -
Aed4g0748 1256 PRINTS Leucine-rich repeat signature 798 811 - -
Aed4g0748 1256 ProSiteProfiles Leucine-rich repeat profile. 800 822 IPR001611 GO:0005515
Aed4g0748 1256 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 10 1253 - -
Aed4g0748 1256 Gene3D Ribonuclease Inhibitor 340 388 IPR032675 -
Aed4g0748 1256 Gene3D Ribonuclease Inhibitor 280 339 IPR032675 -
Aed4g0748 1256 SUPERFAMILY Protein kinase-like (PK-like) 929 1238 IPR011009 -
Aed4g0748 1256 SMART LRR_typ_2 629 653 IPR003591 -
Aed4g0748 1256 SMART LRR_typ_2 486 510 IPR003591 -
Aed4g0748 1256 SMART LRR_typ_2 558 581 IPR003591 -
Aed4g0748 1256 SMART LRR_typ_2 702 725 IPR003591 -
Aed4g0748 1256 SMART LRR_typ_2 798 822 IPR003591 -
Aed4g0748 1256 SMART LRR_typ_2 197 221 IPR003591 -
Aed4g0748 1256 SMART LRR_typ_2 677 701 IPR003591 -
Aed4g0748 1256 SMART LRR_typ_2 749 773 IPR003591 -
Aed4g0748 1256 SMART LRR_typ_2 293 317 IPR003591 -
Aed4g0748 1256 SMART LRR_typ_2 125 148 IPR003591 -
Aed4g0748 1256 SMART LRR_typ_2 149 173 IPR003591 -
Aed4g0748 1256 SMART LRR_typ_2 414 438 IPR003591 -
Aed4g0748 1256 SMART LRR_typ_2 245 269 IPR003591 -
Aed4g0748 1256 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1082 1094 IPR008271 GO:0004672|GO:0006468
Aed4g0748 1256 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 10 1253 - -
Aed4g0748 1256 Gene3D Phosphorylase Kinase; domain 1 914 1034 - -
Aed4g0748 1256 Pfam Protein kinase domain 959 1234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0748 1256 Gene3D Ribonuclease Inhibitor 392 516 IPR032675 -
Aed4g0748 1256 Gene3D Ribonuclease Inhibitor 517 868 IPR032675 -
Aed4g0748 1256 Pfam Leucine rich repeat N-terminal domain 40 75 IPR013210 -
Aed4g0748 1256 Gene3D Transferase(Phosphotransferase) domain 1 1035 1255 - -
Aed4g0748 1256 ProSiteProfiles Protein kinase domain profile. 954 1242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0748 1256 Pfam Leucine rich repeat 780 835 IPR001611 GO:0005515
Aed4g0748 1256 Pfam Leucine rich repeat 512 571 IPR001611 GO:0005515
Aed4g0748 1256 Pfam Leucine rich repeat 127 186 IPR001611 GO:0005515
Aed4g0748 1256 ProSitePatterns Protein kinases ATP-binding region signature. 960 983 IPR017441 GO:0005524
Aed4g0748 1256 SMART serkin_6 954 1237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0748 1256 SUPERFAMILY L domain-like 50 384 - -
Aed4g0748 1256 SUPERFAMILY L domain-like 339 646 - -
Aed4g0748 1256 SUPERFAMILY L domain-like 603 862 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0748 Aed-Chr4 6227209 6232195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0748 615 847 Receptor kinase-like Gene Family AT1G17750 33.571 7.47e-27 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aed4g0748 Pkinase 8.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0748 - - gmx:100797153 2010.34