Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0730 ATGTTTCGTTCCCAACTCTTCAAACCCTTTCTTCTCTGTCTAAAGGGACTCACAGTCACAACACTCTCTCCCAAACATATCTCACACACTACACACTCACAGCAACAACACTCCTTCGCGGTTTCATACCTCATTAACACATGCGGCTTCTCGCCGGAAACCGCTCTCAGCGCCGCCGAGCACGTCCGCTTCGACACCCCTCAGAAGCCCGATTCAGTAATCGCTTTCTTCTCAAACAACGGATTCACCCTTTCCCAGATAAACAGCATCGTCAAAAGGGTACCCAATGTTCTCACTTGCAACCCCCACAAGAGGCTTTCGCCAAAGTTTGAATTTTTACTCTCAAAAGGTGCTTCTCCCTCCGACATCGTGCACCTCGTGAACCGGTGCCCCAGAGTCGTGGGCTCCAGCTTAAAAAAAAGCGTTGTCCCCACCTTCGAATTGGTGAGAAGGTTCCTTCAATCTGATAAGAAAACCATTGAGTGTGTACTTTCTAGTAGGCATTTCCTTGATTATAAAGTTGCTTCTGAGAATGTGAGGATGTTGGTTGATGATGTTGGAGTCAAGGACTCCAACATCACCTATTTGTTCCGTACGAGGCCTTCTATACTCTTGTCTAAGGACTTGAGGAGGACTGTTGATGAAATTAAGGAAATGGGGTTTGATCCTTCCAAGATAGGCTTTGTGATTGCCTTGCATGCCAAGAAGAGTGTGTCGAAATTGCGGTGGGATGCCAAAGTTGATGTCTGCAAGAGCTGGGGTTGGTCTGAGGAATTGGTGCTTGATGCTTTCAGGAGGCATCCTCTCTTCATGTTGGGGTCCAGAGATAAGATTGATGATGTGATGAGATTTTGTGTTGATCAGTTGGGTTGGGACCCTTTGGCTCTCGCCAAAATTCCAAAGATGTTCGGGTATAGCTTGGAGGGAAGGATCATTCCAAGGGGTTTGGTGGTTCAGTATTTGATCACAAAGGGCTTGAGAGAGAAGAGTGCCAGCTTGTTAACCCCATTTGGTGTTTCTGAGAAGATGTTTCTTGAAAATTATATGATGCGTTTTAAGGAGGAAGTGTGTCAGCTATCAAAGCTTTACCAGGAAAAAATGAGTTTCCAAGAAAACAGGGTGGATGTTGAGCTACAATACAAACTCATCAGCAATCTAGTGCATTGTATTAGCATAGCAATGCTATTACCTGAAAAAGTATAG 1203 0.4522 MFRSQLFKPFLLCLKGLTVTTLSPKHISHTTHSQQQHSFAVSYLINTCGFSPETALSAAEHVRFDTPQKPDSVIAFFSNNGFTLSQINSIVKRVPNVLTCNPHKRLSPKFEFLLSKGASPSDIVHLVNRCPRVVGSSLKKSVVPTFELVRRFLQSDKKTIECVLSSRHFLDYKVASENVRMLVDDVGVKDSNITYLFRTRPSILLSKDLRRTVDEIKEMGFDPSKIGFVIALHAKKSVSKLRWDAKVDVCKSWGWSEELVLDAFRRHPLFMLGSRDKIDDVMRFCVDQLGWDPLALAKIPKMFGYSLEGRIIPRGLVVQYLITKGLREKSASLLTPFGVSEKMFLENYMMRFKEEVCQLSKLYQEKMSFQENRVDVELQYKLISNLVHCISIAMLLPEKV 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0730 400 Pfam mTERF 75 280 IPR003690 GO:0003690|GO:0006355
Aed4g0730 400 Pfam mTERF 245 344 IPR003690 GO:0003690|GO:0006355
Aed4g0730 400 Gene3D Transcription termination factor 3, mitochondrial 176 361 IPR038538 -
Aed4g0730 400 PANTHER CGI-12 PROTEIN-RELATED 30 369 IPR003690 GO:0003690|GO:0006355
Aed4g0730 400 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 30 369 - -
Aed4g0730 400 SMART mt_12 88 119 IPR003690 GO:0003690|GO:0006355
Aed4g0730 400 SMART mt_12 293 327 IPR003690 GO:0003690|GO:0006355
Aed4g0730 400 SMART mt_12 124 155 IPR003690 GO:0003690|GO:0006355
Aed4g0730 400 SMART mt_12 194 222 IPR003690 GO:0003690|GO:0006355
Aed4g0730 400 SMART mt_12 261 292 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0730 Aed-Chr4 6081564 6083321 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aed4g0730 mTERF 3.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0730 K15032 - gmx:100792944 475.322