Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0729 ATGTTGAACACCCTTCTCTACAAATGCGTCACTTTCACTGCAACATCATCACGACGTTACCACCCTCTTTTCCGCCACTACCCATTACTCTTTTCTCCGCGTTTCTGCACAACAACAACAACCGCTTCAAATTCAAATTCACGTTCATTTGCTGTATCCTACCTTATCCACAATTTCGGTCTCTCCCCTGAATCTGCTTCCAAAACGTCTGACTCCTACAACATTTGTTTCCAAACCCCAGAAAAGCCCGAGTCAGTAATCATGTTCTTCAGAGAACGTGGTTTCTCTAACATCCAAATAACCAATATGGTTAGAAAGCTACCATGGCTTCTTTCATGCAACCCCTGCAAAAGGGTATTGCCAAAGTTTGAATTTTTACTCTCGAAAGGTGTTTCTACCTCTCAAATTGTTGACCTAGTGAGTAAGTACCCTAAAATGTTGACTCCAAGTTTGAAGAATAATATAGTCCCGACCTATGATTTGGTATACAGATTCTTGCAATCTGATGAGAACACTGTTGCTTGTATGTTTAGTAATTCACTCTTCTCCCGTGGCCATCTCGTGGCACTTAACATCAGAATGATGCTTGAGAATGGAGTGAGTGAATTAACCATTGCAAGATTGCTCCGGAACCGGAGTAAGGCAGTGTTCAACTCGACTGATATGCTTAAGGTGGTGGAGGAAGTGAAGGATTTAGGGTTTAATCCCTCAAAAACAGCTTTTGCTATTGCATTGCTTGCCATGAAAAGTAATAGTCAAACCTTGTGGAAGGAGAAAATTGATGCCTTTAAGAAATGGGGTTGGTCTGATGAAGCCTTTACTGAAGCATTTAGGAGGCACCCTCATTGTATGTTGACATCCATTGACAAAATAAATATAGTGATGAGCTTTTGGGTCGATCAGATGGGCTGGGATGCTTTGGCCCTTGTCAAAGGTCCAAAGATTTTTGGGATGAGTATGGAGAAAACGATCATTCCAAGAGCCACGGTAGTGCAGTTGCTTCTTGAGAAAGGTTTGCGGAAAAGGAATGCAAGCATAACTACCCCGATTATGATATCTGAAAAGAGGTTCCTGAACAGGTTTATAGAATGCTTTAAGGAGGAGTCTTCTGATCTGTTGAAGCTGTATGAGGAAAAGCTGAATCTTGCATATACCAGTGAGAAGTCTGGCTTGTTGTGCACCAAATAA 1188 0.4167 MLNTLLYKCVTFTATSSRRYHPLFRHYPLLFSPRFCTTTTTASNSNSRSFAVSYLIHNFGLSPESASKTSDSYNICFQTPEKPESVIMFFRERGFSNIQITNMVRKLPWLLSCNPCKRVLPKFEFLLSKGVSTSQIVDLVSKYPKMLTPSLKNNIVPTYDLVYRFLQSDENTVACMFSNSLFSRGHLVALNIRMMLENGVSELTIARLLRNRSKAVFNSTDMLKVVEEVKDLGFNPSKTAFAIALLAMKSNSQTLWKEKIDAFKKWGWSDEAFTEAFRRHPHCMLTSIDKINIVMSFWVDQMGWDALALVKGPKIFGMSMEKTIIPRATVVQLLLEKGLRKRNASITTPIMISEKRFLNRFIECFKEESSDLLKLYEEKLNLAYTSEKSGLLCTK 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0729 395 Gene3D Transcription termination factor 3, mitochondrial 177 375 IPR038538 -
Aed4g0729 395 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 16 385 - -
Aed4g0729 395 Pfam mTERF 253 358 IPR003690 GO:0003690|GO:0006355
Aed4g0729 395 Pfam mTERF 88 235 IPR003690 GO:0003690|GO:0006355
Aed4g0729 395 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Aed4g0729 395 SMART mt_12 206 235 IPR003690 GO:0003690|GO:0006355
Aed4g0729 395 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Aed4g0729 395 SMART mt_12 306 340 IPR003690 GO:0003690|GO:0006355
Aed4g0729 395 SMART mt_12 274 305 IPR003690 GO:0003690|GO:0006355
Aed4g0729 395 PANTHER CGI-12 PROTEIN-RELATED 16 385 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0729 Aed-Chr4 6078304 6079491 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aed4g0729 mTERF 6.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0729 K15032 - gmx:102663414 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2393 6 25562862 25563947 Aed4g0729 4 6078304 6079491 PCT