Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0727 ATGTTTATTTCCAAGCTCTTCAAGCATCTCTGTCTGAAGAGAACCATAACAGCAACACTTCCATTTCCAACTCCAAAACCGAACCCTTTTTTATCAACACTCTCTTCCAAATTCAGCTCCATCGCTTCTCATTCTCAACAACACTCATTCACGGTTTCCTACCTCATAAACAATCTCGACTTCTCACCAGAAACCGCTCTAAAGGCCTCAAAACTAGTCCGTTTCGAAACCGCCCAAAAGCCCGATTCAGTCATCGCCTTCTTCAGAAGCCACGGTTTCTCCGATTCCCACATAAACAGCATTATCAAAAGGGCACCCAACGTGCTCACATGCGACCCCAACAACAGGGTTTTGCCAAAGTTTGATTTTTTACGCTCCAAAGGTGCTTCAAGCTCTGACATAGTGGAGTTGGTGAATAGAAGCCCCAGAATCCTCTACGCAAGCCTCGGGAATAGCATAATCTCTACCTTTGAATTGGTGAGAAGGTTCCTTCAATCTGATAAGAAAACTATTGATTGTATACGCACTTGTCACCATTTCTTTGGTAATGATATTGCGGCACAAAATGTGAGATTGTTGCTTGATGATGGAGTCAAGGACTCCAACATCTCCTATTTGTTACTTAGAAGGCCTTCTGTAATCGTGGCTCGTGGCATGAGGGAGATCGTGGTTGAACTTAAGGAAATGGGATTTCAAACCTCAAAGTTCAATTTTGTGGTTGCAATGCTGGCCAAGAGGGCCGTTTCGAAAATCCGGTGGGACGCCAAAGTTGAAGCCTTTAAGAGATGGGGTTGGTCTGAAGAATTGGTTCTTCATGTGTTTAGGAGGGGCCCCCTCTTGATGTTGTCCTCCAAGGATAAGATTGATAAGGTGATGGGATTTTGGGTTGATCAGTTAGGTTGGGACTCTTTAGCCCTTGCCAAGAAGCCGGTGATGTTTGGATTTAGTTTGGAGAAAAGGATCGTGCCAAGGGCTCGCGTTGTCCAGTATTTACTCGCGAAAGGTTTGAGGAAAAAGACTGCCAGTTTGCTTAGCCCATTTATTATTCCTGAAATGTTGTTTCTTGAAAAGCTTGGGGTGAGCCTTGTTGCAATGGCAAAGTATGCTGCTTCAGTTTTGGAACTGATATCACAGGTTTTGGTTCTCTAA 1149 0.4413 MFISKLFKHLCLKRTITATLPFPTPKPNPFLSTLSSKFSSIASHSQQHSFTVSYLINNLDFSPETALKASKLVRFETAQKPDSVIAFFRSHGFSDSHINSIIKRAPNVLTCDPNNRVLPKFDFLRSKGASSSDIVELVNRSPRILYASLGNSIISTFELVRRFLQSDKKTIDCIRTCHHFFGNDIAAQNVRLLLDDGVKDSNISYLLLRRPSVIVARGMREIVVELKEMGFQTSKFNFVVAMLAKRAVSKIRWDAKVEAFKRWGWSEELVLHVFRRGPLLMLSSKDKIDKVMGFWVDQLGWDSLALAKKPVMFGFSLEKRIVPRARVVQYLLAKGLRKKTASLLSPFIIPEMLFLEKLGVSLVAMAKYAASVLELISQVLVL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0727 382 Gene3D Transcription termination factor 3, mitochondrial 172 368 IPR038538 -
Aed4g0727 382 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Aed4g0727 382 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
Aed4g0727 382 SMART mt_12 303 337 IPR003690 GO:0003690|GO:0006355
Aed4g0727 382 SMART mt_12 204 232 IPR003690 GO:0003690|GO:0006355
Aed4g0727 382 SMART mt_12 271 302 IPR003690 GO:0003690|GO:0006355
Aed4g0727 382 Pfam mTERF 188 342 IPR003690 GO:0003690|GO:0006355
Aed4g0727 382 Pfam mTERF 86 289 IPR003690 GO:0003690|GO:0006355
Aed4g0727 382 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 22 357 - -
Aed4g0727 382 PANTHER CGI-12 PROTEIN-RELATED 22 357 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0727 Aed-Chr4 6066450 6068632 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aed4g0727 mTERF 2.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0727 K15032 - gmx:102666739 423.32