Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0719 ATGCTTAGCCCGGAAGGTGAACTTAAAATAAGTTTTGGCTATCAATGCAATAGTGATAGTGATAGAGGTATACCCATCAATGAAATCCACAGAACAAGCAGTTTCTCTTGCTTGTCTGGTGCTGCCTTAAGTGCAAATGCTACACTTGCCAACACAAACATCTGCAATGGTGTAATAGGAGAAGAAATCCTTCCGAGTTTGGACTCTCCTAAATCGTTTCGTAGGGTACCCTCTTCTCCAAGTTTTCCAAAGTTGGACATGTTATCATCTTCTGTCAATAGTAGTTTGTCAAACCTAAGTTGCAGTCCATCCCCTACAAGTAATATGCTTGAATATGACCCTTGTACGTTAAAATCCATGAGTGCTCCTTCCAGAAGTGAAGGTTTTCTTAATGGCATGGAAGTTCAAGTTGCTGGAGGAGCAGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTCTTCTGTGCAATTTATGATGGCTTTAATGGGAGAGATGCAGCTGACTTTCTGGCTGGTACCCTTTATGACACAATCATATCTTATTTTAATACGTTATACTGGGATTTGGAATCAGATTCCATAAAAGCTACCAACGATGCGGGTATGGGTGGATCCTTTCAATATAACTTTGATGATAGTCTTAATCTTCAGAAGCAACAATCTTCATCAACATTTAAGGGAAACAATTCTAGTCTCAGCTGTTTTGCAAACAGTACTCCACCTTCCAAGCCAGAAGCATCTCCTAAATCATTTTCACAAGCTATGGTACTTGGTGGCCTCCAGCATGTTCTTAGTCAGGTTGAGAATGATTTCCTGTACATGGTTGAGCAGGAAATGGAGGAACGACCAGATTTAGTTTCTATTGGATCTTGTGTTCTACTTGTACTTCTTCATGGGAATGATTTGTATACACTTAATCTAGGCGACAGCAGAGCAGTATTGGCAACATGTAATACAGATAATAGAATGAATGGGAATGGGAGATTGAAGGCTATCCAGCTCACAGATAGTCATACTGTTGACAATGAAGCTGAAAGAGCTCGACTTCTTGCTGATCACCCTGATGATCCTAAAACCATAGTGGCAGGGAAAGTGAAGGGAAAACTGAAGGTTACAAGAGCTTTAGGAGTGGGCTACTTGAAAAAGAAAATTCTGAATGATGCATTGATGGGAATCCTTCGAGTTCGTGATCTTAAAAGCCCGCCATATATTTCAACTGATCCATCACTGAATGTGCGCAAAATCTCAGATTCTGATCAATTTGTTATAGTTGGGAGTGATGGCTTCAGCATGGAAGAGTTGATGAGTGTTCCAGATGGGAGGAGGAGGAAGTACCATGATGACGTGACCGTAATGGTGATCATACTTGGGATGAATCAACGGACTTCAAAAGCATCAATTTGCATCTAG 1425 0.4091 MLSPEGELKISFGYQCNSDSDRGIPINEIHRTSSFSCLSGAALSANATLANTNICNGVIGEEILPSLDSPKSFRRVPSSPSFPKLDMLSSSVNSSLSNLSCSPSPTSNMLEYDPCTLKSMSAPSRSEGFLNGMEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISYFNTLYWDLESDSIKATNDAGMGGSFQYNFDDSLNLQKQQSSSTFKGNNSSLSCFANSTPPSKPEASPKSFSQAMVLGGLQHVLSQVENDFLYMVEQEMEERPDLVSIGSCVLLVLLHGNDLYTLNLGDSRAVLATCNTDNRMNGNGRLKAIQLTDSHTVDNEAERARLLADHPDDPKTIVAGKVKGKLKVTRALGVGYLKKKILNDALMGILRVRDLKSPPYISTDPSLNVRKISDSDQFVIVGSDGFSMEELMSVPDGRRRKYHDDVTVMVIILGMNQRTSKASICI 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0719 474 SUPERFAMILY PP2C-like 142 462 IPR036457 -
Aed4g0719 474 Gene3D - 115 470 IPR036457 -
Aed4g0719 474 PANTHER PROTEIN PHOSPHATASE 2C 2 434 IPR015655 GO:0004722|GO:0006470
Aed4g0719 474 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 434 - -
Aed4g0719 474 PANTHER PROTEIN PHOSPHATASE 2C 433 473 IPR015655 GO:0004722|GO:0006470
Aed4g0719 474 CDD PP2Cc 142 461 IPR001932 -
Aed4g0719 474 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 433 473 - -
Aed4g0719 474 ProSiteProfiles PPM-type phosphatase domain profile. 130 461 IPR001932 -
Aed4g0719 474 Pfam Protein phosphatase 2C 275 434 IPR001932 -
Aed4g0719 474 SMART PP2C_4 120 459 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0719 Aed-Chr4 6014443 6017734 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0719 4 474 PP2C-type Phosphatase Gene Family AT3G16560 55.114 6.08e-175 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0719 - - gmx:100791404 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0719 4 6014443 6017734 Aed4g0719 4 6014443 6017734 ECH