Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0715 ATGGAGGATTCGGCGGCGCAGAAGAGGAAGCAGCGAGAGTTCGCGTTAGCGTCGGTTTCTTCGGTTTCTTCGGCTCCTTCTTCTACTTCTTCGCCGGGGATTGCACTCTTCGCCGGTGACCGTCTTCAAATTACGAACGAATCTCGCGGTATTGATCTCAATGCTCATCTCACAGCTATTCAGCTATTCAGATTAGGTCCTATTGAATCAGTTTGCATGGTGGAAGAGTCTGATGCTGGCAACCAGACGTCGTATTCCAGTGGAGTCACTTTACAGTTTATAAACGAGGAAGAGAGTGAGGCCTTCCATTGTGTATTCCAACAATGGAATAAGGGATTCGTTGTTCAAGGAGGAAACTTACCAAATGGAACTAATGTAATAACTTCTAAAAGCAAATTTGATGAAAAGATAGAGTCGTCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTGCATCAGCAAAATATGTTGCAGGACTATGTGAGGACAGGAACCTATTATGCTGCAGTTTTGGAGAATCGCACAGATTTCACAGGTCGTGTAGTAGTTGATGTTGGTGCTGGTAGTGGTATTTTGTCACTGTTTGCTGCCCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGGAAGCTTATAGCTGGGAACCCAATACTGGGTCAACGAATTACAGTTATTAAAGGCAAAGTTGAGGATGTTGAGTTACCAGAGAAAGCTGATATTCTGATCTCTGAGCCCATGGGCACCTTGTTAGTTAATGAAAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCACCCCTAATGGGAAAATGTTTCCAACAGTGGGAAGGATTCACATGGCTCCTTTCAGTGATGAATATTTGTTTGTTGAAATTGCTAATAAGGCCCTGTTTTGGCAGCAACAAAACTATTATGGTGTTGATTTGACGGCCTTACATGGGACTGCCTTTCAAGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGGTTGTTAATAGCTGCTCCTATGTTTCATGTGATAGACTTTACCAAAATAAAGGAAGAAGAGCTGTATGAAATTGACATTCCTCTCAAATTCACAGCCACTATGGGTGCCAGACTACACGGGTTGGCATGTTGGTTTGATGTACTGTTCAATGGAAGTACTGCACGAAGGTGGCTTACCACTGGCCCTGGTTCACCTACAACCCACTGGTATCAGTTACGGTGTGTTCTCCCACAGCCAATATATGTCATGGCAGGACAAGAAATTACTGGCAGGATGCACTTGATTGCTCACACTGCTCAGAGTTATACAATCTATTTAACATTGTCAGCTAAAACGTGGGGTCCTGGTGCTGAACAAGGAGGGATTCTTCAAACATCATCCTGTAAATTTGATCTGAAAGAACCTTACTATAGAATGTCTCAACCACAATCATATCCATTAACCCAAGACCAGCAACCTCAATCACTTTCACAGACTCAGGATATACATATCCAATCTCAAGATTTGGATGTGGAGATATTGCAACAGCCGTCGCCTAATCCATGTGCTCAGTTTGACTCCCTCATGCAGAATGCATAA 1611 0.4302 MEDSAAQKRKQREFALASVSSVSSAPSSTSSPGIALFAGDRLQITNESRGIDLNAHLTAIQLFRLGPIESVCMVEESDAGNQTSYSSGVTLQFINEEESEAFHCVFQQWNKGFVVQGGNLPNGTNVITSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVLENRTDFTGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPILGQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPNGKMFPTVGRIHMAPFSDEYLFVEIANKALFWQQQNYYGVDLTALHGTAFQGYFSQPVVDAFDPRLLIAAPMFHVIDFTKIKEEELYEIDIPLKFTATMGARLHGLACWFDVLFNGSTARRWLTTGPGSPTTHWYQLRCVLPQPIYVMAGQEITGRMHLIAHTAQSYTIYLTLSAKTWGPGAEQGGILQTSSCKFDLKEPYYRMSQPQSYPLTQDQQPQSLSQTQDIHIQSQDLDVEILQQPSPNPCAQFDSLMQNA 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0715 536 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 1 493 - -
Aed4g0715 536 Gene3D - 287 495 - -
Aed4g0715 536 Pfam Ribosomal protein L11 methyltransferase (PrmA) 179 253 - -
Aed4g0715 536 CDD AdoMet_MTases 184 287 - -
Aed4g0715 536 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 493 IPR025799 GO:0016274|GO:0018216
Aed4g0715 536 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 148 459 IPR029063 -
Aed4g0715 536 Gene3D Vaccinia Virus protein VP39 124 285 IPR029063 -
Aed4g0715 536 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 138 453 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0715 Aed-Chr4 5991478 5999577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0715 145 434 C2H2 Transcription Factor Family AT3G12270 34.286 9.81e-41 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0715 K05931 - gmx:100809620 969.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0715 4 5991478 5999577 Aed4g0715 4 5991478 5999577 ECH
Aed6g2380 6 25493979 25503708 Aed4g0715 4 5991478 5999577 PCT