Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0712 ATGTCTTCTTCCTGGCTAACTTCCCCTTCTTGTTCCACTTTGGACATTGATTCATCTTCCCCCACTGCTCTACTCGTGATTCAGTGGTTGAGGTTTCTTTTCCTGTATCCATGTCCCCAACGAGTCCTTCTTTCTGCAGTTGATTTACTCTTCTTGCTCTCTCTCTTAGCCTTTGCAGTGGTTAAACTCTATTCCCGGTTCACTTCCCACGCCACCTCCAGCTCCACCATCACCAAACCCCTCTTGCAAGAGAAAGACTCTGACTACAAAGTCACCTTCAGGTTCAAACTACCCTTATTGGTAACCACCCTTTTGGCCATAGCTTACACTGTCCTAAGCATCTTGGCCTTCACTCAAACGACCCTTTCCTCATGGAAACTCATAGAGGCACTGTTTCGTCTCTTTCAAGCAGTGTCCAACGTAGCGGTGGTGATCCTAATGGTCCACGAGAAAAAGTTCAAGGCTTCAAAGCACCCTTTGTCGCTGAGAATCTATTGGATTGCAAACTTGGTGGTTTCGTGTTTCTTCACAACTTCAGCCATTGTTCGGTTGGTAACAGTAGATGGAGCAAAACTGGAGCTAAGTTTGAGAGTGGATGACATATTCTCTTTGGTTAACCTTCCACTCTCAGCATTCCTTTTCCTAGTAGCAATAAAAGGGTCAACGGGGATTCAAGTGATTAGAATCTCTGATGTAGTGACAACAACATATCAGTCCATTTACAGTGACAGAAATCTGAGCCCTTATGCTAACTCTTCGCTTTTCTCCAAAATAACGTGGCTTTGGATGAACCCTTTGCTTAACAAAGGGTACCAAACACACCTCAAGCTAGAAGATGTTCCTTCTCTTCCCATTGATTTCAGAGCAGAGAAAATGTCAGAGTCTTTCCACAGCAATTGGCCAAAGCCAGAGGAAAACAGCAAGCACCCCGTAGGACTCACCTTGCTAAGATGCTTCTGGAAGCACATAGCCTTCACCGGCTTCCTTGCAGTTATAAGACTCGGAGTTATGTACATTGGTCCAATGCTTATTCAAAGTTTTGTGGACTTCACCTCAAGAAAAGACAGCACCCCCTACGAAGGCCTTGTTCTGATACTGATACTCTATTTGGCGAAATCAACAGAGGTTCTCTCTGTTCACCAATTCAACTTCCACTCACAGAAACTCGGCATGCTCATCCGTTCAAGCCTCATCACTTCTGTGTACAAGAAAGGTTTAAGGTTGTCTAGCTCTTCCAGGCAGGCTCACGGGACAGGTCAGGTCGTGAACCACATGTCTGTTGACGCGCAACAGCTCGCGGATTTGATGATGCAGTTCCACCCCATATGGCTGATGCCGCTGCAAGTTGCAGCGGCATTGGCTCTTATATACATCAACATTGGAGTGTCGGCGTTCGCGGCGCTGTTCGGGTCGGGTCTGGTGTTTGTTTTCACTATCTTCCGCACCAGGAGGACCAACAGGTTCCAGTTCATGATCATGAAGAGCCGTGACTTGCGGATGAAGGCAACGAACGAGTTGCTGAACAACATGCGTGTCATTAAATTTCAAGCGTGGGAGGAGTACTTTGGGGACAAGATTGGGAAATTCCGCGAAGCCGAGCATGGATGGATTGGGAAATTCCTCTACTACTTTGCTATTAACATGGGGATTCTCAGCTCTGCTCCTTTGCTTGTAACCGTTCTCACGTTCGGGTGTGCTACTCTTATCGGTGTTCCTCTGAATGCTGGAAGCGTGTTTACAATCACTTCTGTGATCAAGATTCTGCAGGAGCCGGTGAGGACTTTCCCTCAGGCTCTCATTGTGATCTCGCAGGCGATGATTTCTCTTGGTAGGTTGGATGAGTTTTTGATGAGTAAGGAGATGGATGAGGATGCGGTGGAGAGAGTTGAGGGTGGCGACGACGACGACAATGACAGTGCCGTAGAGATTAGAGATGGGGAATTCTCTTGGGATGATGCTGATGGGGTTGCGGCTCTCAAGGTTGAAGAGTTGGAGATTAAGAAAGGGGACCATGCTGCTGTTGTGGGAACTGTTGGCTCGGGCAAGTCTTCGTTGTTGGCTTCTGTGTTGGGGGAAATGTTTAAGATTTCAGGAAAGGTCAGAGTTCGTGGTTCAATAGCCTATGTAGCACAGACATCATGGATTCAGAATGCAAGCATCCAAGACAACATATTGTTTGGTTCACCAATGAACAGAGACAAGTACAGTGAAGCTGTTAGAGTGTGCTGTTTAGAGAAGGATCTTGAAATGATGGAACATGGAGACCAGACTGAGATTGGAGAAAGGGGTATTAACCTCAGTGGTGGCCAGAAGCAACGTGTGCAACTTGCTAGAGCTGTTTACCAAGACTGTGACATATATCTTCTTGATGATGTTTTCAGTGCTGTTGATGCACAAACTGGATCATTTATTTTTAAGGCAAGTACAGAATGTATTATGGGAGCTCTAAAAAATAAGACCATTTTACTTGTAACCCACCAAGTTGACTTCTTGCATAATGTTGACTGTATAATGGTAATGCGAGAAGGGAAAATCGTGCAAAGTGGCAAGTATGATGAACTTCTCAAAGCAGGTTTGGACTTTGGTGCACTTGTGGCTGCTCATGAATCCTCTATGGAGATGGCAGAGTCTAGTGACCAAGGTGGCGAAGATTCTGCTCTGTCTCCCAAGCTGGCTCGAATCCCTTCGAAAGAAAAGGAAAACGCAGGCGAAAAGCAGCCTCAAGATCAATCCAAGCCTAGCAAGACCTCAGCAAAGCTCATTGAAGAAGAGGAAAGGGAAACTGGGCGTGTGAACCTCAAAGTGTATAAACACTACTTCACTGAAGCATTTGGATGGTGGGGTGTTGCACTGATGCTGGCAATGTCTCTGGCATGGATTTTGTCCTTCTTGGCTGGTGACTACTGGCTAGCAATTGGAACTGCAGAAGATAGCGCGTTTCCTCCTTCTACATTCATCATTGTCTATGCTTGCATAGCAGGTCTTGTATGCACTGTGGTGATGACCAGATCACTCTTGTTTACATATTGGGGTCTCAAGACATCTCAAAGCTTCTTCAGTGGAATGCTTGATAGCATCCTGCATGCACCAATCATCCTCATTGTCACATGCCAAAATGCTTGGGAAACGGTCTTCCTCTTAATCCCACTGTTCTGGCTGAATAACTGGTATCGGAAATATTACCTTGCATCTTCTCGGGAACTGACTCGTCTTGATTCTATCACCAAAGCTCCTGTGATTCACCACTTTTCAGAAACCATTGCTGGTGTTATGACAATCCGTGGCTTCAGAAAGCAGAACTCATTTTGTCAAGAAAATATTGACAAAGTCAATGCTAGTCTGAGAATGGATTTCCACAACAATGGTGCTAATGAATGGCTTGGTTTTCGCTTGGACTACATGGGAGTGGTTTTCCTTTGCTGTGCCACTATTTTCATGATCTTTCTGCCAAGTGCTATTATTAAGCCAGAATATGTTGGTTTGTCTTTGTCCTATGGTTTGGCTCTCAGTAGTCTCTTGGCATTTACCATAAGCATGACTTGTTCTGTTGAGAACAAATTGGTTTCAGTTGAGAGAATAAAGCAGTTCACTAACCTTCCCTCAGAAGCTCCATGGAAAATTGCTGATAAAACTCCTCCTCAGAATTGGCCCAGTCAAGGCACTATTGAGTTCGGTATCGGCCAAATACTCCTCTGGTTCTCAAGGGAATATCTCTCACCATGGAAGGAGGAGAAAAGATTGGTGTTGTTGGTCGCACAGGGAGTGGAAAATCAACCCTCATTCAGGTTGATTGAGCCTTCAGCTGGGAAAATATTAGTTGATGGGATCAACATTTGCACTGTTGGTCTTCATGATCTGAGGTCTAGATTTGGAATCATTCCTCAAGAGCCTGTCCTCTTTCAAGGAACAGTACGAAGCAACATTGACCCTCTTGGATTGTATTCAGAGGAAGAAATTTGGAAGAGCCTTGAGCGCTGCCAACTGAAAGATGTGGTGGCTGCAAAGCCAGAGAAACTTGAGGCCCCAGTGGTTGATGGTGGAGACAATTGGAGTGTGGGGCAAAGACAGCTTCTTTGCTTGGGAAGGATCATGCTAAAACGCAGCAAAATATTGTTCATGGATGAGGCAACAGCATCTGTAGATTCACAAACTGATGCTGTGATACAAAAGATCATCCGCGAGGACTTTTCGGATCGTACAATTATCAGCATTGCTCATAGAATACCAACAGTCATGGATTGTGACAAGGTTTTAGTCATTGATGCAGGCTATGCAAAGGAATATGACAAACCATCACGTTTGCTAGAAAGGGTTTCACTTTTTGGAGCATTGGTTAAGGAGTACTCCAATAGATCAGCTTAA 4362 0.4514 MSSSWLTSPSCSTLDIDSSSPTALLVIQWLRFLFLYPCPQRVLLSAVDLLFLLSLLAFAVVKLYSRFTSHATSSSTITKPLLQEKDSDYKVTFRFKLPLLVTTLLAIAYTVLSILAFTQTTLSSWKLIEALFRLFQAVSNVAVVILMVHEKKFKASKHPLSLRIYWIANLVVSCFFTTSAIVRLVTVDGAKLELSLRVDDIFSLVNLPLSAFLFLVAIKGSTGIQVIRISDVVTTTYQSIYSDRNLSPYANSSLFSKITWLWMNPLLNKGYQTHLKLEDVPSLPIDFRAEKMSESFHSNWPKPEENSKHPVGLTLLRCFWKHIAFTGFLAVIRLGVMYIGPMLIQSFVDFTSRKDSTPYEGLVLILILYLAKSTEVLSVHQFNFHSQKLGMLIRSSLITSVYKKGLRLSSSSRQAHGTGQVVNHMSVDAQQLADLMMQFHPIWLMPLQVAAALALIYINIGVSAFAALFGSGLVFVFTIFRTRRTNRFQFMIMKSRDLRMKATNELLNNMRVIKFQAWEEYFGDKIGKFREAEHGWIGKFLYYFAINMGILSSAPLLVTVLTFGCATLIGVPLNAGSVFTITSVIKILQEPVRTFPQALIVISQAMISLGRLDEFLMSKEMDEDAVERVEGGDDDDNDSAVEIRDGEFSWDDADGVAALKVEELEIKKGDHAAVVGTVGSGKSSLLASVLGEMFKISGKVRVRGSIAYVAQTSWIQNASIQDNILFGSPMNRDKYSEAVRVCCLEKDLEMMEHGDQTEIGERGINLSGGQKQRVQLARAVYQDCDIYLLDDVFSAVDAQTGSFIFKASTECIMGALKNKTILLVTHQVDFLHNVDCIMVMREGKIVQSGKYDELLKAGLDFGALVAAHESSMEMAESSDQGGEDSALSPKLARIPSKEKENAGEKQPQDQSKPSKTSAKLIEEEERETGRVNLKVYKHYFTEAFGWWGVALMLAMSLAWILSFLAGDYWLAIGTAEDSAFPPSTFIIVYACIAGLVCTVVMTRSLLFTYWGLKTSQSFFSGMLDSILHAPIILIVTCQNAWETVFLLIPLFWLNNWYRKYYLASSRELTRLDSITKAPVIHHFSETIAGVMTIRGFRKQNSFCQENIDKVNASLRMDFHNNGANEWLGFRLDYMGVVFLCCATIFMIFLPSAIIKPEYVGLSLSYGLALSSLLAFTISMTCSVENKLVSVERIKQFTNLPSEAPWKIADKTPPQNWPSQGTIEFGIGQILLWFSREYLSPWKEEKRLVLLVAQGVENQPSFRLIEPSAGKILVDGINICTVGLHDLRSRFGIIPQEPVLFQGTVRSNIDPLGLYSEEEIWKSLERCQLKDVVAAKPEKLEAPVVDGGDNWSVGQRQLLCLGRIMLKRSKILFMDEATASVDSQTDAVIQKIIREDFSDRTIISIAHRIPTVMDCDKVLVIDAGYAKEYDKPSRLLERVSLFGALVKEYSNRSA 1453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0712 1453 ProSitePatterns ABC transporters family signature. 766 780 IPR017871 GO:0005524
Aed4g0712 1453 Gene3D ABC transporter type 1, transmembrane domain 307 616 IPR036640 GO:0005524|GO:0016021
Aed4g0712 1453 Gene3D ABC transporter type 1, transmembrane domain 1034 1203 IPR036640 GO:0005524|GO:0016021
Aed4g0712 1453 CDD ABC_6TM_ABCC_D2 945 1197 IPR044726 GO:0140359
Aed4g0712 1453 Gene3D - 1259 1443 IPR027417 -
Aed4g0712 1453 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 324 604 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed4g0712 1453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 638 863 IPR027417 -
Aed4g0712 1453 Gene3D ABC transporter type 1, transmembrane domain 891 1033 IPR036640 GO:0005524|GO:0016021
Aed4g0712 1453 SUPERFAMILY ABC transporter transmembrane region 946 1202 IPR036640 GO:0005524|GO:0016021
Aed4g0712 1453 Pfam ABC transporter 1262 1378 IPR003439 GO:0005524
Aed4g0712 1453 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1017 1185 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed4g0712 1453 SUPERFAMILY ABC transporter transmembrane region 314 622 IPR036640 GO:0005524|GO:0016021
Aed4g0712 1453 Pfam ABC transporter transmembrane region 1033 1149 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed4g0712 1453 Pfam ABC transporter transmembrane region 325 592 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed4g0712 1453 SMART AAA_5 668 844 IPR003593 -
Aed4g0712 1453 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 641 867 IPR003439 GO:0005524
Aed4g0712 1453 CDD ABC_6TM_ABCC_D1 325 612 IPR044746 GO:0140359
Aed4g0712 1453 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1032 1453 - -
Aed4g0712 1453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1261 1446 IPR027417 -
Aed4g0712 1453 Gene3D - 617 886 IPR027417 -
Aed4g0712 1453 CDD ABCC_MRP_domain2 1261 1431 - -
Aed4g0712 1453 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 59 1031 - -
Aed4g0712 1453 MobiDBLite consensus disorder prediction 896 923 - -
Aed4g0712 1453 CDD ABCC_MRP_domain1 641 844 - -
Aed4g0712 1453 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1199 1447 IPR003439 GO:0005524
Aed4g0712 1453 Pfam ABC transporter 663 792 IPR003439 GO:0005524
Aed4g0712 1453 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1032 1453 - -
Aed4g0712 1453 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 59 1031 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0712 Aed-Chr4 5959926 5968758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0712 641 893 Calmodulin-binding Proteins AT2G36910 30.072 1.67e-26 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0712 - K05665 gmx:100780167 2507.64