Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0710 ATGCCGCAGGGCAATGCCGCCGCAGCAGCTGCGCTGCTGGACCACGGCGGCGATGCCGGCGACGCCGTCATGGCGCGGTGGCTGCAGTCCGCCGGCCTGCAGCATCTCGCCTCTCCTCTCGCATCCACCGCCATCGATCATCGCCTTCTCCCCAACCTTCTCATGCAGGGTTATGGAGCACAGTCTGCTGAGGAGAAGCAGAGGCTTTTAAAGTTAATGAGAAACCTCAATTTTAATGGGGAATCTGGTTCAGAGCCATACATGCCCACCACCGCCCAATCTTTAGGTGGAGTGGCTGGGTCGGATGGGTTTTATTCTCCTGAGTTCAGAGGGGATTTTGGAGCTGGGCTTTTGGATCTGCATGCTATGGACGATACAGAGCTTTTGTCTGAGCATGTAGTTTCAGAACCTTTTGAGCCATCACCCTTCGTGCCTGGAGATACTAGAGTATTTGAAGACGATTTCGATCCAATTAACAGCAAGCTGGAAAGTGGGGAAGCAGATACCGATGCATCATTTTCCTTACCTATGAATAGCACAAGGGAAAATAATGTTGCTAAGCTTAAAGTTGTGGTACGCAAAAGACCTTTAAACAAGAAGGAGCTTGCTAAGAAGGAGGATGATGTTGTTACTGTAACTGACAATGCATATTTGACAGTCCATGAACCGAAACTAAAGGTTGATTTGACGGCTTATGTGGAGAAGCATGAGTTTTGTTTTGACGCTGTGCTTGATGAACATGTTACCAATGATGAAGTATACCGAAGTACAGTTGAACCAATTATTCCTACAATTTTTGAGCGAACCAAAGCTACCTGTTTTGCTTACGGTCAGACAGGAAGTGGAAAAACATACACAATGCAACCTTTACCACTCAGAGCTGCAGAAGACCTTGTTCGACAGTTGCATCAGCCAGTTTACCGGAATCAGAGATTTAAATTGTGGCTTAGCTACTTTGAGATATATGGTGGAAAACTCTATGATCTTCTCAGTGACAGAAAGAAACTTTGCATGAGGGAAGATGGACGGCAGCAAGTTTGTATTGTAGGACTGCAAGAATTTGAAGTTTGTGACGTACAAATTGTCAAAGAATTCATTGAAAGGGGAAATGCTGCAAGAAGTACAGGATCAACTGGTGCTAATGAGGAGTCCTCCAGGTCACATGCTATCTTGCAACTGGTTGTAAAGAAGCACAGTGAAGTTAAAGTGAACAAGCGGAACAAAGATGGGAATGAGGTAAGAAGTGGGAAGGTTGTGGGGAAAATTTCTTTTATTGATCTTGCTGGAAGTGAACGAGGTGCTGACACTACTGATAACGATCGTCAGACACGGATTGAAGGAGCAGAAATCAACAAGAGCCTTTTGGCTTTGAAGGAGTGCATTCGTGCTTTAGACAATGACCAGATCCATATTCCATTTCGAGGAAGCAAACTTACAGAAGTGCTTCGTGACTCCTTTGTGGGTAATTCGAAGACTGTTATGATCTCTTGTATATCTCCCGGTGCTGGGTCATGTGAACACACACTTAATACCTTGAGATATGCAGATCGCAGGGTTAAAAGTCTATCCAAAAGTGGGAATCCTAGGAAAGACCAGGTCCCAAATCCTGTACCACAAACTAATAATAAGGAGGTTTCATCCACATCATCCCTTTCAGTCAGTGCTAGTGCAGAGGATTTTAATGATCAACGCCAAGAGAAAACAGTTGATATGGGCAGGAGATTTGTCGAAAGGGAAAATTCTTCGCATAGCTCTGCTGCTGCTCTTGACAAACAGCCATTAAGTTTTTCTTCAAATTACCTATCAAATGGGCGAGAGGAAAAAGGCTTTCCTTCAGCTTCAATGGACAGGGAGAGGTTTGAAGTGAAGAACTCACATGGTGACTCTACCAGTCAAAAGATGAACTATTATTCACAAAGTGATACAGAAGAGAAAGTGCAAAAGGTGTCTCCCCCACGCAGAAAAGGGTCCAAGGATGAAAAATCCGAAAGGCCTGCTAACTGGATGAAAAAGGATGCCAACGGTTCTGATCTCTTCACTACAAGCTCCAAGCAGCAGAGCACAGGGAATTATGGCACGGTGTCTAAGGATGAAAAGTCTGAAAGGCCTGCAAACTGGATGAAAAGGGATACCAGTGGTTCTGATCTTGTCACTACAAGCTCCAAGCAGCAGAGCACTGGGAGTTATGTCAGTGTGTCTAAGGATGAAAAGTCTGAACGGCCTGCAAACTGGATGAAAAGGGATGCTAATGGCTCTGATCCCTTCACTACAAGCTCCAAGCACCAGAGCACAGGGAATTATAACAATATCACCACTGGATCCAGGCTTAATGAAACAGAATCCTCTCCTGATGGGAATATCAGTGCAGTGCTTGAGGAGGAAGAAGCACTAATTGCCGCTCATAGGAAAGAAATTGAGGATACGATGGAGATTGTTCGTGAAGAAATGAAACTGTTGGCAGAAGTGGACCAACCGGGAAGCCGTATTGACAACTATGTAACTCAATTGAGCTTTGTGCTGTCCCGCAAAGCAGCTAGTCTGGTGGGTCTCCAAGCCCGTCTTGCAAGATTCCAACATCGACTGAAAGAACAGGAGATTCTAAGTAGAAAAAGACTTCCCCGTCAACAATAA 2631 0.4508 MPQGNAAAAAALLDHGGDAGDAVMARWLQSAGLQHLASPLASTAIDHRLLPNLLMQGYGAQSAEEKQRLLKLMRNLNFNGESGSEPYMPTTAQSLGGVAGSDGFYSPEFRGDFGAGLLDLHAMDDTELLSEHVVSEPFEPSPFVPGDTRVFEDDFDPINSKLESGEADTDASFSLPMNSTRENNVAKLKVVVRKRPLNKKELAKKEDDVVTVTDNAYLTVHEPKLKVDLTAYVEKHEFCFDAVLDEHVTNDEVYRSTVEPIIPTIFERTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRQLHQPVYRNQRFKLWLSYFEIYGGKLYDLLSDRKKLCMREDGRQQVCIVGLQEFEVCDVQIVKEFIERGNAARSTGSTGANEESSRSHAILQLVVKKHSEVKVNKRNKDGNEVRSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPGAGSCEHTLNTLRYADRRVKSLSKSGNPRKDQVPNPVPQTNNKEVSSTSSLSVSASAEDFNDQRQEKTVDMGRRFVERENSSHSSAAALDKQPLSFSSNYLSNGREEKGFPSASMDRERFEVKNSHGDSTSQKMNYYSQSDTEEKVQKVSPPRRKGSKDEKSERPANWMKKDANGSDLFTTSSKQQSTGNYGTVSKDEKSERPANWMKRDTSGSDLVTTSSKQQSTGSYVSVSKDEKSERPANWMKRDANGSDPFTTSSKHQSTGNYNNITTGSRLNETESSPDGNISAVLEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSRIDNYVTQLSFVLSRKAASLVGLQARLARFQHRLKEQEILSRKRLPRQQ 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0710 876 Coils Coil 791 822 - -
Aed4g0710 876 MobiDBLite consensus disorder prediction 526 559 - -
Aed4g0710 876 MobiDBLite consensus disorder prediction 674 694 - -
Aed4g0710 876 Pfam Kinesin motor domain 193 517 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g0710 876 MobiDBLite consensus disorder prediction 711 732 - -
Aed4g0710 876 PANTHER KINESIN-RELATED PROTEIN 6 695 732 - -
Aed4g0710 876 PANTHER KINESIN-RELATED PROTEIN 6 733 874 - -
Aed4g0710 876 Gene3D Kinesin motor domain 167 523 IPR036961 -
Aed4g0710 876 MobiDBLite consensus disorder prediction 627 645 - -
Aed4g0710 876 MobiDBLite consensus disorder prediction 750 785 - -
Aed4g0710 876 CDD KISc_KIF2_like 187 517 - -
Aed4g0710 876 Coils Coil 847 867 - -
Aed4g0710 876 SMART kinesin_4 185 528 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g0710 876 PANTHER KINESIN-RELATED PROTEIN 6 1 661 - -
Aed4g0710 876 PANTHER KINESIN-RELATED PROTEIN 6 658 695 - -
Aed4g0710 876 MobiDBLite consensus disorder prediction 597 785 - -
Aed4g0710 876 PANTHER KINESIN-LIKE PROTEIN 1 661 - -
Aed4g0710 876 MobiDBLite consensus disorder prediction 646 670 - -
Aed4g0710 876 PRINTS Kinesin heavy chain signature 268 289 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g0710 876 PRINTS Kinesin heavy chain signature 421 439 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g0710 876 PRINTS Kinesin heavy chain signature 378 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g0710 876 PRINTS Kinesin heavy chain signature 471 492 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g0710 876 MobiDBLite consensus disorder prediction 610 626 - -
Aed4g0710 876 MobiDBLite consensus disorder prediction 521 565 - -
Aed4g0710 876 PANTHER KINESIN-LIKE PROTEIN 695 732 - -
Aed4g0710 876 PANTHER KINESIN-LIKE PROTEIN 658 695 - -
Aed4g0710 876 PANTHER KINESIN-LIKE PROTEIN 733 874 - -
Aed4g0710 876 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 517 IPR027417 -
Aed4g0710 876 ProSitePatterns Kinesin motor domain signature. 420 431 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aed4g0710 876 ProSiteProfiles Kinesin motor domain profile. 187 521 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0710 Aed-Chr4 5944427 5952134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0710 179 517 Calmodulin-binding Proteins AT5G65930 33.048 6.43e-40 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0710 K10393 - gmx:100800014 1602.8