Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0707 ATGGAAGGTAATAAGGACGAAGCATTGCGCTGCGTTGGCATCGCCGAAGAAGCAATCGCGTCAAGGAACAAAGGCCGCGCCCTCAAATTCCTCAAAATCGCGCAGCGCCTCAACCGCGACTTGCCCCTACAATCCCTGCTCGACAAGTGCGAGCGCCTCGATTCTAGCTCCGCCGCCGCAGGCGGCAGCGGCGGCGCTCCGGCGAACGGTCCTTCTCCGCGCCGTCGCGAGGGTCTGAACGGAGAGAGGAATAATAATTACACGGAAGAAAACGTGAAGCTGATTAGGGAAATCAAAGGAAAGAGCGATTACTACGCGATTCTGGGATTAGAGAAGAGCTGCTCCGTGGAAGAGATTCGGAAAGCGTATCGGAAGCTCTCTCTGAAGGTTCATCCCGATAAGAACAAAGCGCCGGGCTCCGAAGACGCGTTCAAGAAGGTTTCGAAGGCTTTCAAGTGTTTGAGCGATGACGGTTCCAGAAGGATGTACGACCAGACCGGAACCGCCGACGATTTCGACAACACCGAGGTAAACACGTTCCGGCGAAGAAGAAGAAGAACGACGACGACAACAACGCGCGATTTCTTCGAAGACGAGTTCGATCCAGACGAGATATTCAGGGCGTTCTTCGGACAATCCGACGTGTTCGGGAGAAACCACGTTTACCGAACCCGCGGGATGGGGAATCCGAATCAGCATCGACACGAGTTCAACGCGGGATCGGGAGGAGGGAGGCATCATAATGTGATGCTTCTGATTCAGCTTTTGCCGTTTTTGATCATTGTGCTGCTCGCGTACTTGCCTTTTTCCGAACCTGAGTACTCCTTGCACAAGCATTACAACTACCAGATTCCGAGGACCACGGAGCTGCACGGGGTACAGTTCTTCGTGAAGTCGTCGGCGTTTGACGTGAATTATCCGCGGGGTAGCGATGCCCGCGAGGCGGTTGAGGAGAGTGTGATAAAGGATTATAGGAGTATGCTGAGAAGATACTGTCAGGTGGAGATGCAGAGACGGAGCTGGAATAGGAATCTGCCTGCTCCTCACTGTGATAAGCTGCAGAACTTTGCAGTCGTGGCATGA 1083 0.5374 MEGNKDEALRCVGIAEEAIASRNKGRALKFLKIAQRLNRDLPLQSLLDKCERLDSSSAAAGGSGGAPANGPSPRRREGLNGERNNNYTEENVKLIREIKGKSDYYAILGLEKSCSVEEIRKAYRKLSLKVHPDKNKAPGSEDAFKKVSKAFKCLSDDGSRRMYDQTGTADDFDNTEVNTFRRRRRRTTTTTTRDFFEDEFDPDEIFRAFFGQSDVFGRNHVYRTRGMGNPNQHRHEFNAGSGGGRHHNVMLLIQLLPFLIIVLLAYLPFSEPEYSLHKHYNYQIPRTTELHGVQFFVKSSAFDVNYPRGSDAREAVEESVIKDYRSMLRRYCQVEMQRRSWNRNLPAPHCDKLQNFAVVA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0707 360 Gene3D DnaJ domain 100 221 IPR036869 -
Aed4g0707 360 PRINTS DnaJ domain signature 159 178 IPR001623 -
Aed4g0707 360 PRINTS DnaJ domain signature 139 159 IPR001623 -
Aed4g0707 360 PRINTS DnaJ domain signature 105 123 IPR001623 -
Aed4g0707 360 PRINTS DnaJ domain signature 123 138 IPR001623 -
Aed4g0707 360 SMART dnaj_3 102 159 IPR001623 -
Aed4g0707 360 PANTHER AT29763P-RELATED 1 358 - -
Aed4g0707 360 MobiDBLite consensus disorder prediction 56 85 - -
Aed4g0707 360 SUPERFAMILY Chaperone J-domain 99 212 IPR036869 -
Aed4g0707 360 CDD DnaJ 103 156 IPR001623 -
Aed4g0707 360 Pfam DnaJ domain 103 164 IPR001623 -
Aed4g0707 360 Pfam Domain of unknown function (DUF1977) 270 340 IPR015399 -
Aed4g0707 360 PANTHER CHAPERONE PROTEIN DNAJ 49 1 358 - -
Aed4g0707 360 ProSiteProfiles dnaJ domain profile. 103 167 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0707 Aed-Chr4 5922922 5930071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0707 4 164 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 27.273 2.95e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0707 K09518 - gmx:100820432 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0707 4 5922922 5930071 Aed4g0707 4 5922922 5930071 ECH