Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0692 ATGTCTCAAGAGTGGAACAACCATTCACCTGATTTACGCAAATTCAAGGAGGGTAATCCAAACATTGTAGAAGAATCCGATGCAAAGGGTTACAGTCTCAGCGGAAAAATCATGCTTTCCGCGATAGTTCTCCTCTTCTTCGTCGTCGTTGTTATGCTCTGTCTTCACATTTACGCGCGCTGGTACCTCAGGCGCGCTCGCCGTCGCCAGCTCCGCCGACACCGCCGCCGCTCTCAGCTTGTCTTCCACAGCGACGCCGCCACCCCGGCCGCCGTCACGCGCGGCCTCGACGCTGCTGTCCTCGCCACGCTCCCTGTCTTCTCCTATAACCCCAAGGCCGAGCCGGAAACCGCGCCGGAATGCGCGGTTTGCTTGTCGGAGTTCAACCCGGGCGAAACGGGTCGGGTCTTGCCGAAGTGTAACCACAGCTTCCACATCGAGTGTATTGACATGTGGTTTCACTCTCACGCCACGTGTCCCTTGTGCCGCGCACCGGTTGAACGCGCGCCCGAACCGGAAGTGGTTGTTATAACGGTGGACGAACCGGTTTCAACCGGTTCGGGCACAGTGGAAGCTGAGAACCGGACCGGTTCTGCTTCTTCGTCGGGTGGGTCGAGGAAGTCTTCGTTGGTTGGTGTGACAATTGAGGTGCCTCCGAGGGACGAGACTTTTCAACACGACTCAAGTTGCGATTCACCCTCGACTCAGTCGTCGTTTCGCTCTCCGATGAGTCGCATGTTGTCGTTTACGAGGATGCTCGGCAGGGAACGGAAGGGGAACGCTTCGCCGTCGTCTGGTGGCGGTGCTTGTAGCTCAACCGCCGAGTGTGGCGCTGAGCGAGAGGAGACTCAGTGA 855 0.5813 MSQEWNNHSPDLRKFKEGNPNIVEESDAKGYSLSGKIMLSAIVLLFFVVVVMLCLHIYARWYLRRARRRQLRRHRRRSQLVFHSDAATPAAVTRGLDAAVLATLPVFSYNPKAEPETAPECAVCLSEFNPGETGRVLPKCNHSFHIECIDMWFHSHATCPLCRAPVERAPEPEVVVITVDEPVSTGSGTVEAENRTGSASSSGGSRKSSLVGVTIEVPPRDETFQHDSSCDSPSTQSSFRSPMSRMLSFTRMLGRERKGNASPSSGGGACSSTAECGAEREETQ 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0692 284 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Aed4g0692 284 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 26 207 - -
Aed4g0692 284 MobiDBLite consensus disorder prediction 184 209 - -
Aed4g0692 284 MobiDBLite consensus disorder prediction 184 284 - -
Aed4g0692 284 CDD RING-H2_EL5_like 120 163 - -
Aed4g0692 284 Pfam Ring finger domain 120 163 IPR001841 -
Aed4g0692 284 SMART ring_2 121 162 IPR001841 -
Aed4g0692 284 MobiDBLite consensus disorder prediction 228 245 - -
Aed4g0692 284 PANTHER RING-H2 FINGER PROTEIN ATL64 26 207 - -
Aed4g0692 284 SUPERFAMILY RING/U-box 106 168 - -
Aed4g0692 284 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 96 171 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0692 Aed-Chr4 5825086 5825940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0692 6 284 Rapid Response to Elicitors AT3G16720 47.176 4.37e-68 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0692 - - gmx:100791545 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0692 4 5825086 5825940 Aed4g0692 4 5825086 5825940 ECH
Aed6g2363 6 25380668 25381387 Aed4g0692 4 5825086 5825940 PCT