Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0690 ATGAGTGGACATAACAACAACAACAACCATGAACAACAAATTAGAATAAGGTTTGGCATTCTTAGCATCTCTTCAATCCTCCTTGTGGCTACGTTGCCTAATGTTGCAGTGGCTTTTGGTTTAAGGCCGCCTGGAGGATTACTTAACCCTGAACCTAAAATAGGAGAAGTTCCACATCCAGTTCCAGGGCAAGAGCAAGGCTTCAATGTCTTAAACCCTAACAGTAATGGAAACGTGCTTTGCCAAGCAACACAGTTCCAAGAAATGTGCAAGAAAAGCCTTGGGAGTGAACTTTTCGTAGCCACGGACCCTAAGAAACTGATAGAAGCAGGGTTCAATGCCTCGATAGTGGAGATTGTAAGCCACATAAACAACTCAACCCTTTATAATCAGATGGTCAAGGACGACATGACAAGACAAGCCATGGACACTTGTACTGAGGTTTTGGACTATGCAGTTGATGCCATTCTCAAATCTCAGGATGTTTTGCAGAAGTTTGAGTTCACCAAGATGAATGATTTTGTTTATGACCTAAAGGTGTGGCTCACAGGGAGCATGTCTCACCAATACACATGCTTGCAAGGCTTCAAGAATGCAAGATCAGATGTTGGTGAGACAATGACCCAGGTTATGAGTGCCTCTTTGGAGCTTAGTAGCAATGCATTGGACATGGCTAATGCAATCCACAAGTTCCTCAAAATTATGAACCCTAACAAATTTGGCAATAGGAGACTTCTTGAGGAACCAAACGTTGGGAATGGTTTCCTTTCGTTTGTGAGTGAAGGTAACAGACGTTTTCTTCAAGATTCATTTTCAAGCATTAAGCCTAATGTAGTTGTTGCACAAGATGGGTCTGGCCAATTTAAAACACTCACTGAAGCTCTTAAGACTGTTCCTCCAAACAATGCTCAAGCTTTTGTGATTCAAATCAAGGCTGGTGTGTATAAAGAGATTGTGAATGTTAGCAAGGCAATGACACATGTCACTCTTATTGGAGATGGTCCTACAAAGACTGTATTCACTGGCAGTTTGAACTTTGTTGATGGTATCTCAACTTTCAACAGTGCTACCTTTGGTGTACACGGTACCAACTTCATGGCAAAGGATATTGGATTTGAAAACTCAGCAGGTGCTGCAAAAAAGCAAGCAGTGGCACTTTTAGTAACAGCAGACCAAGCCATGTTCTTCAACTGCCAAATAGACGGGTACCAAGACACACTCTTTGCACAATCTCAACGCCAATTCTACCGTGACTGCACCATAAGTGGCACAGTTGACTTCATCTTTGGGGATGCATTTGCAATGTTCCAAAACTGCACACTGATTGTGAGAAACCCCATTCATGGCCAACGTTGCATGGTGACAGCAGGTTCTAGAAACAAAGTTGATAGCCCTAGTGCCCTTGTGTTCCAAAGTTGCCACTTCACAGCAGTGCCTGAAGTGGCCACTGCAAAACCTAAGATAGCATTCCTTGGAAGGCCATGGTTGCCATACTGTAAAGTGGTCATCATGGACTCTCAGATTGAAGACGTGTTTCTGCCAGAAGGGTATGAGGCATGGACTGGAAACACAAACAAGGAAACTTGCAGTTATTATGAGTATAACAACAAGGGCCCTGGTGCTGACACATCCTTAAGAGTTAAATGGCCTGGTGTTAAGACTATTACCGCTGTTGAAGCAAATGATTATTATCCTGGCAAGTTCTTTGAACTTGCTAATTCAACTCAACGTGATGCTTGGATTGTTCAAGCTGGGGTACCTTACTCTCTTGGCCCTATGAAGACCCCAGTTGCTACGGGCCTGGCCGCAGGCCCCACCGCAGCATCAGCCGCAGGCCCTACCGCGTCGGCCCAAAAGCCTACAGCAGCATCCGCCACAGGCCCCACCGCAGCATCGGCCGCAGGCCCTACCGCGTCGGCCCAAAAGCCTACAGCAGCATCCGCTACAGGCCCTACCGCAGCAACGGCCGCAGGCGCTACCACAGCCAGCCCAACCATAAGGATGCCCTAG 2010 0.4597 MSGHNNNNNHEQQIRIRFGILSISSILLVATLPNVAVAFGLRPPGGLLNPEPKIGEVPHPVPGQEQGFNVLNPNSNGNVLCQATQFQEMCKKSLGSELFVATDPKKLIEAGFNASIVEIVSHINNSTLYNQMVKDDMTRQAMDTCTEVLDYAVDAILKSQDVLQKFEFTKMNDFVYDLKVWLTGSMSHQYTCLQGFKNARSDVGETMTQVMSASLELSSNALDMANAIHKFLKIMNPNKFGNRRLLEEPNVGNGFLSFVSEGNRRFLQDSFSSIKPNVVVAQDGSGQFKTLTEALKTVPPNNAQAFVIQIKAGVYKEIVNVSKAMTHVTLIGDGPTKTVFTGSLNFVDGISTFNSATFGVHGTNFMAKDIGFENSAGAAKKQAVALLVTADQAMFFNCQIDGYQDTLFAQSQRQFYRDCTISGTVDFIFGDAFAMFQNCTLIVRNPIHGQRCMVTAGSRNKVDSPSALVFQSCHFTAVPEVATAKPKIAFLGRPWLPYCKVVIMDSQIEDVFLPEGYEAWTGNTNKETCSYYEYNNKGPGADTSLRVKWPGVKTITAVEANDYYPGKFFELANSTQRDAWIVQAGVPYSLGPMKTPVATGLAAGPTAASAAGPTASAQKPTAASATGPTAASAAGPTASAQKPTAASATGPTAATAAGATTASPTIRMP 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0690 669 Gene3D - 271 591 IPR012334 -
Aed4g0690 669 TIGRFAM PME_inhib: pectinesterase inhibitor domain 80 227 IPR006501 GO:0004857
Aed4g0690 669 MobiDBLite consensus disorder prediction 611 669 - -
Aed4g0690 669 Pfam Pectinesterase 277 569 IPR000070 GO:0030599|GO:0042545
Aed4g0690 669 ProSitePatterns Pectinesterase signature 2. 421 430 IPR033131 -
Aed4g0690 669 PANTHER PECTINESTERASE 14 595 - -
Aed4g0690 669 Pfam Plant invertase/pectin methylesterase inhibitor 80 224 IPR006501 GO:0004857
Aed4g0690 669 MobiDBLite consensus disorder prediction 604 669 - -
Aed4g0690 669 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 230 IPR035513 -
Aed4g0690 669 SUPERFAMILY Pectin lyase-like 273 589 IPR011050 -
Aed4g0690 669 SMART PMEI_2 72 224 IPR006501 GO:0004857
Aed4g0690 669 CDD PMEI-like_3 80 230 - -
Aed4g0690 669 PANTHER PECTINESTERASE 14 595 - -
Aed4g0690 669 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 80 229 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0690 Aed-Chr4 5814243 5817478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0690 9 664 Carbohydrate Esterase AT3G05610 37.874 1.27e-163 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0690 K01051 - gmx:100785214 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2361 6 25374223 25375959 Aed4g0690 4 5814243 5817478 PCT