Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0677 ATGCCCGGTAATGGCAAGACTACCCTTGCAGAAGAAGTATTTAAGAAACTACAACCTGAGTATGATGGTTGCTATTTTCTAGCCAATGAAAGAGAACGATCAAGTAGACATGGAATAGATTCTTTGCGAAAAGAAATTTTTTCTGGACTTCTAGCAAATCTTGTGAAAATTGACGATTCAAATTCCTTTCATATTGGTATTGATAGAAGAATTTGTTATATGAAAGTTTTTATTGTCCTCGATGATGTTAATGATCCAGATCACCTAGACAAATTACTAGGACCAATTAGTAATTTTGGATCAGGTAGTAAAATAATTGTAACAACTAGAAACGTGCAAGTGCTTAATTGTAACAATGCTAAGGAGATATACCAACTTGGGGAGTTCAGTTCAGATAAAGCCCTTGAACTTTTCAATTTGAATGCCTTTAAGCCAAGTGATCATCAATGGGAGTACAATGAATTAGCAAAAAAGGTGGTCAATTATGCCAAAGGCAATCCATTAGTTCTTAAAGTCTTGGCTCAACGTCTTTGTGGAAAAAATAAAGAAGAATGGAAAGGTATGCTACGCATGCTTAACAGAATGCTTCCTAAAAGTATTTATGAAACAATGAAACTGAGTTATGATTGTCTAGACCTCCAAGAGAGACAATTCTTTTTAGATCTTGCATGTTTTTTTCTTAGATCGCACACAACAATAAATGTGGAGGATCTAAAATCTTTATTGAAGGATGATGAAGGTGAGGAGTCAGTGACTTTTATGTTAGGAAGGTTGAAAGACCATGCTCTTATAACATTTCCCGAGGATAGTATTGTATCTATGCATGATAGTTTAAAAGAAATGGCTCGGGAAATTGCTCGACAAGAGTTTAATAAAGACCCTAGACGCTGCAGTCGGTTGTGGGATCTCAATGAGATTTTCAAAGCATTGGAAAATAACAAGAGTACTGAGGCCATTAGAAGCATACAAATTCACTTGCCAACTTTCTTGAAGCAAAAGTTAGGTCTTCACATATTTGAAAAGATGAAAAGACTACAATTTCTGGAAATTAATGGGGAATGTGAAGAAGATTTCTTTGATCAACATAATATTCTTGAGGAAGAGCTTCAATTTTCAGCAATTGAACTGAGATTTCTTTGTTGGTATTATTGCCCTCTAAAATCCTTGCCAGAGAATTTTTCCGCTGAAAAACTTGTTATATTGAAATTGCCAAACGGAGAAATCGAAAACCTCTGGTATGGAGTGAAGAATATAATGAATTTAAAAGAACTTAACCTCACTGACTCCAAGATGTTAGAGGAGCTGCCAGATTTATCAAATGCCACAAATCTTGAAGTACTGGTTCTCAAGGGTTGTTCAAAGTTGAGTACGGTGCATCCATCTATTTTCTCTCTCAGAAAACTTGAAATATTGAACCTTCAAGAGTGCACATCCCTCACCACACTTGCAAGCGATTCCAATTTATGCAGCCTGAGTTATCTCAACCTTGATAAATGCGAGGAACTTTGGAAACTCTCATTGGTAACAGAGCATATTAAAGAATTGAGATTAAGATGGACGAAAGTCAAAGCATTTTCCTTTACATTTGGAGTCAAGCTTCAGTTTCTACATCTCGAAGGAAGTGTCATTAAGAAGCTACCTTCATCCATTAAGGATCTAATGCAACTGTCACATCTAAACGTTAGTTGTTGTTCAGAGCTACAAAAAATACCAAAGCTTCCCCCGTTACTTAAAACCCTAGATGTCAGAAATTGCTCTTCACTTAAGACTCTAGAGGAGCTTCCTCCTTCCCTTAAAACTCTAAGAATGGGAAACTGCAAATTACTTCGGACTTTACCAAAGCTTCCCCATTTCCTTAAAACTCTTACAGCCCAAGACTGCACATCATTAAAGACTGTGTTATTCCTTTCAACTGCTGATAATGATGAACAACTTAGGGAAAACAGGAGAGTGGTTCTATTCTGGAATTGCCTGAAATTGAATCAACAATCTCTCGAGGACATTGCATTGAATGCGGCAATCAATGTAATGAAATTTGCAAACAGACCTCACGATGATTTTAAAAATTGCAATGATTATGATAAAAGATATCATTCTTATCAAGTTGTTTACGCGTATCCAGGAAGTAGCTTTCCAGAGTGGTTGGAGTATAAGACAACAGATCATTATATAGATATTGATCTGTCGTCTTCAGCTCCACCTCCGAGCTTCATTTTCTGCTTTGCCTTTGGTAATTATGGAGACACATCTTTGGACAGAATTGAAGCTAACATTACTATAATTGATGGTGACAGTGTTGAAATGTACATAGGTCTTCGGAATGGCACGATTGAATCAGATCACATATGTGTGATGTATGACCAAAGATGTTCTGCCTTCCTAAATAGCAGAGTCCAAAATAAGAAAAAGTTTAAAATTGAGGTTAGAATGGTGTTACGATCCTCATCCAAACAAATTTTTGAACTGCCGCAGCAGATGTTTAAAGGATTCGGGTTCGGCCTTGGGATATAG 2511 0.3652 MPGNGKTTLAEEVFKKLQPEYDGCYFLANERERSSRHGIDSLRKEIFSGLLANLVKIDDSNSFHIGIDRRICYMKVFIVLDDVNDPDHLDKLLGPISNFGSGSKIIVTTRNVQVLNCNNAKEIYQLGEFSSDKALELFNLNAFKPSDHQWEYNELAKKVVNYAKGNPLVLKVLAQRLCGKNKEEWKGMLRMLNRMLPKSIYETMKLSYDCLDLQERQFFLDLACFFLRSHTTINVEDLKSLLKDDEGEESVTFMLGRLKDHALITFPEDSIVSMHDSLKEMAREIARQEFNKDPRRCSRLWDLNEIFKALENNKSTEAIRSIQIHLPTFLKQKLGLHIFEKMKRLQFLEINGECEEDFFDQHNILEEELQFSAIELRFLCWYYCPLKSLPENFSAEKLVILKLPNGEIENLWYGVKNIMNLKELNLTDSKMLEELPDLSNATNLEVLVLKGCSKLSTVHPSIFSLRKLEILNLQECTSLTTLASDSNLCSLSYLNLDKCEELWKLSLVTEHIKELRLRWTKVKAFSFTFGVKLQFLHLEGSVIKKLPSSIKDLMQLSHLNVSCCSELQKIPKLPPLLKTLDVRNCSSLKTLEELPPSLKTLRMGNCKLLRTLPKLPHFLKTLTAQDCTSLKTVLFLSTADNDEQLRENRRVVLFWNCLKLNQQSLEDIALNAAINVMKFANRPHDDFKNCNDYDKRYHSYQVVYAYPGSSFPEWLEYKTTDHYIDIDLSSSAPPPSFIFCFAFGNYGDTSLDRIEANITIIDGDSVEMYIGLRNGTIESDHICVMYDQRCSAFLNSRVQNKKKFKIEVRMVLRSSSKQIFELPQQMFKGFGFGLGI 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0677 836 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 222 IPR027417 -
Aed4g0677 836 Pfam NB-ARC domain 1 207 IPR002182 GO:0043531
Aed4g0677 836 Gene3D - 1 124 IPR027417 -
Aed4g0677 836 Gene3D Ribonuclease Inhibitor 508 666 IPR032675 -
Aed4g0677 836 PRINTS Disease resistance protein signature 70 84 - -
Aed4g0677 836 PRINTS Disease resistance protein signature 463 479 - -
Aed4g0677 836 PRINTS Disease resistance protein signature 163 177 - -
Aed4g0677 836 Gene3D Ribonuclease Inhibitor 296 507 IPR032675 -
Aed4g0677 836 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 1 823 - -
Aed4g0677 836 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 823 IPR044974 GO:0006952
Aed4g0677 836 Gene3D - 129 212 IPR042197 -
Aed4g0677 836 SUPERFAMILY L domain-like 336 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0677 Aed-Chr4 5686328 5693889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0677 3 626 WRKY Transcription Factor Family AT4G12020 31.825 1.12e-68 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0677 - - gmx:112999556 1233.01