Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0675 ATGGGACAAGAATCAGATTACAAAACCCAGTTGGTGTTGGATGTTTGCTCCATTTCCACACGTTATGTTGTGTGTGTTCATAGACTTGTCTCTAACAATGCCAAGCCACATTTCATAGATTGGTATTGCATTCTTGGAGTGGAAGAAAATGCAGGGGTGAACACCATTCGCAAGCAATACCATAAACTTGGTAGGCTTAAACTCATTTTTTATGCCTTGCAACTTCATCCAGATAAGAATAAACACCCTAAGGCTGAAATTGCATTCAGGCTTGTCTCTGAGGCATATATATGTCTGTCTGATGCTGCAAAAAGGAAAGGTTTTGACTCAAAGAGGCATAAGAATTTCTGCTTTGAGTGCAATAGAATCCCTTATAGTACATCCAAACATGTCCCTGGCAATTCCAACAGTTCAAGTTTCGAGACATGTAGGGACTCAAAATCTTACAAAGTTTGGAGAAATATTAAGGAGATGAGAGAAAGACTGAAGGAGGAGGCTAAAGTGATAGAGAACTGTCTAAGGAAAAATTCAATGTCAAAGAAAGAATCTCCACTCTACAATCCAGATGACTATAGACATGGAGGCAGTTTCAAGCATAGAGTTGAGAGAGAAAACCCTGTTTTCAATCCATTGAAGTACTTGTATCAAGGGTACCCTCATCTGAGGGGCAATGTTTACAAGAATTCTGAGACATTAACTAGATTAACTAGTTTTGATTATGGGAATTCCATTAACGATTAA 741 0.3846 MGQESDYKTQLVLDVCSISTRYVVCVHRLVSNNAKPHFIDWYCILGVEENAGVNTIRKQYHKLGRLKLIFYALQLHPDKNKHPKAEIAFRLVSEAYICLSDAAKRKGFDSKRHKNFCFECNRIPYSTSKHVPGNSNSSSFETCRDSKSYKVWRNIKEMRERLKEEAKVIENCLRKNSMSKKESPLYNPDDYRHGGSFKHRVERENPVFNPLKYLYQGYPHLRGNVYKNSETLTRLTSFDYGNSIND 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0675 246 PRINTS DnaJ domain signature 68 83 IPR001623 -
Aed4g0675 246 PRINTS DnaJ domain signature 84 104 IPR001623 -
Aed4g0675 246 PRINTS DnaJ domain signature 42 60 IPR001623 -
Aed4g0675 246 Pfam DnaJ domain 40 109 IPR001623 -
Aed4g0675 246 SUPERFAMILY Chaperone J-domain 32 114 IPR036869 -
Aed4g0675 246 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 235 - -
Aed4g0675 246 Gene3D DnaJ domain 39 169 IPR036869 -
Aed4g0675 246 PANTHER BNAC03G44070D PROTEIN 4 235 - -
Aed4g0675 246 CDD DnaJ 40 101 IPR001623 -
Aed4g0675 246 Coils Coil 155 175 - -
Aed4g0675 246 ProSiteProfiles dnaJ domain profile. 40 112 IPR001623 -
Aed4g0675 246 SMART dnaj_3 39 104 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0675 Aed-Chr4 5660591 5662377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0675 40 110 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 41.333 2.47e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0675 - - gmx:100781104 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0675 4 5660591 5662377 Aed4g0675 4 5660591 5662377 ECH
Aed6g2354 6 25342991 25345459 Aed4g0675 4 5660591 5662377 PCT