Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0662 ATGGCCATGGCCTTGCATGTCCAAAGCTTCTTCTATTTTCTGTTTGCCACCATTACCGTCGCCGTCATGTTCTCCGCGGCACCGTCGGTGTCTCAGCCGCAAGCCGCTGGGTCCTGCAACGGGATATTCCTGTCGTATGTGTATACTGGCGGCTCGCGGCTGCCACCAAATGTGTCGGACCCGGCGGAGCAGCCGTACCGGTTCTCGTCGACGCTGACGGTGCTGAACAACGGGCTGGAGGAGCTGAAGGCCTGGAGGGTGTTCGTAAGGTTTCAGCACGGCGAGTGGTTGGTGTCTGCGTCCAACGCGGTGCTCGCCGACGGCACGAGCCTCCCCGGGTCGGTGGAAAACGGCACCGTTTTGAGTGGTGCGACGCTGAGGGATCTGAAGACGGCGGTGGCGACCGCCGGGGACTTGAATCAGATGCAGGTTCAGGTGGAGATGTTGGGGACCTTGCTTGGAGTGGCGCCACCCGCTGTTCCCATGCCTTCGTCTGTTACCTTGGCTAACGATGGATTCGTCTGTGGTCAACTCTCTGGTCAAGGGAGCAATGAAACTCATGTCTGTTGCACAAGTGACCCCAATTTCAAAACAAACATAACCACAGAAGAAGAGTTCCAACCCCGGCAAAAGGGTGATCTTAGCATCACATACGACATCATAAGAACCTACGATTCCGATTACTGGGCAGAGGTAACAATCGCAAACCACAACCCCTTAGGCCGTCTTGACAACTGGAGACTAAGCTGGGACTGGGAAAACAGCGAGTTCATATACACATTGAAGGGTGCATATCCACTAAACGTGGATTCCTCTGACTGTGTCTTCGGTGAACAAGGCGTGTTCTACAAGGAACTCGACTTCGCCAACGTTATGAACTGCGAGAGAAGACCAACAGTAGTGGATCTCCCTCCCACAATGTTCAACAACACAGACTTTGGAATGGTCCCATTTTGTTGTAGGAATGGTACTATCTTGCCACCAACGATGGACCCCAGCTTGTCATCTTCTAGGTTCCAAATGCACGTGTTCAAAATGCCACCGAACCTTAACCGCTCCAATCTCGCACCACCGCGTAACTGGGAGATCAAAGGTACCCTTAACCCTGATTATGCATGTGGTAACCCTATTAGGGTTAGTCCTAGTGAATCTCCTGATCCAGCACACCCACCTTCGAACAAATCCGCTATTGCAAGCTGGCAAGTGGTGTGCAACATCACAAACACAATTCGTAAATGTTGTGTTTCTTTCTCTGCTTATTACAACGACTCAGCTATTCCATGCAGCACGTGTGCATGTGGATGCCCCAGCAACCCGGAGAGAACGTGTAGTGCAACTTCACAAGCCATGTTGCTTCAACCAGAGTCACTTCTTGTCCCTTTTGAGAACAGAACCGAAAAGACTCTTGCTTGGGCTGATTTAAAACACTTACCTGTTCCTAATCCTATGCCTTGTGGTGATAACTGTGGTGTGAGCATAAACTGGCACGTGGCGACGGATCACCGTAACGGGTGGACTGCAAGGGTGACACTTTTCAACTGGGGTGAGACTAGTTTTGCGGACTGGTTTGCTGCAGTGGAAATGGACAAAGCTGCAAAGGGGTTTGAGGAAGTGTATTCTTTCAATGGAAGCGTTTTGGAGAGTGTGGATGATCATGATGACACCATAATATTCATGCAAGGGAAGGAGGGGCTGAACTTTCTTGTGGCGGAAACTGATGGATCTAACCCTCGGAGAGACCCTAGGGTGCCAGGGAAACAGCAATCTGTGATCTCCTTTACTAAGAAGAACACTCCTGGAATCAATGTGGTTGCTGGTGATGGGTTTCCTAGTAAGGTTTTCTTCAATGGGGAGGAATGTTCTCTTCCTTCAGTGTTGCCAAGCAGTGGTACTAGAAAGGAGGCTTCATTGTCTACTACGATGTTCTTAGTGCTGTTTTTCTCGATCCTCTTCATGTGCCAATGGTGA 1968 0.5061 MAMALHVQSFFYFLFATITVAVMFSAAPSVSQPQAAGSCNGIFLSYVYTGGSRLPPNVSDPAEQPYRFSSTLTVLNNGLEELKAWRVFVRFQHGEWLVSASNAVLADGTSLPGSVENGTVLSGATLRDLKTAVATAGDLNQMQVQVEMLGTLLGVAPPAVPMPSSVTLANDGFVCGQLSGQGSNETHVCCTSDPNFKTNITTEEEFQPRQKGDLSITYDIIRTYDSDYWAEVTIANHNPLGRLDNWRLSWDWENSEFIYTLKGAYPLNVDSSDCVFGEQGVFYKELDFANVMNCERRPTVVDLPPTMFNNTDFGMVPFCCRNGTILPPTMDPSLSSSRFQMHVFKMPPNLNRSNLAPPRNWEIKGTLNPDYACGNPIRVSPSESPDPAHPPSNKSAIASWQVVCNITNTIRKCCVSFSAYYNDSAIPCSTCACGCPSNPERTCSATSQAMLLQPESLLVPFENRTEKTLAWADLKHLPVPNPMPCGDNCGVSINWHVATDHRNGWTARVTLFNWGETSFADWFAAVEMDKAAKGFEEVYSFNGSVLESVDDHDDTIIFMQGKEGLNFLVAETDGSNPRRDPRVPGKQQSVISFTKKNTPGINVVAGDGFPSKVFFNGEECSLPSVLPSSGTRKEASLSTTMFLVLFFSILFMCQW 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0662 655 Pfam COBRA-like protein 228 407 IPR006918 GO:0010215|GO:0031225
Aed4g0662 655 PANTHER COBRA-LIKE PROTEIN 7 3 652 - -
Aed4g0662 655 PANTHER COBRA-LIKE PROTEIN 7 3 652 - -
Aed4g0662 655 SUPERFAMILY Carbohydrate-binding domain 210 259 IPR008965 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0662 Aed-Chr4 5597458 5600230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0662 39 637 COBRA Gene Family AT4G16120 64.298 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0662 - - gmx:100778971 1176.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2344 6 25286486 25289634 Aed4g0662 4 5597458 5600230 PCT