Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0652 ATGGAGGAGGTTATGTTGGTGGTTTTTTCCAGTTGTTTGATTGGACCTCAAAATCCCGTAAGAAATTATTTGCAGCCAAGTCAGAATTACCAGGTTGATGAAGATGAAATTGGAGTAGGGGCAAGTGTTAGAGGAAGTTGTGATCATAGTTATGCTTCATCTGTTACAGATGATGAAGCATATGGAACAAGGCCCCCTAGTGTTGTTGCCAGGCTTATGGGATTAGATTCCTTGCCTCATTCCAGTTTTTCTGATCCTTATTCTACCCCATATTTTGACACTCGATCCCTTCAAGACTCTCATTACTTCAAGAAAAACCTTGGTCACCAGCAGCATGACCTTCATACCCCATATTCTGGAAAGCTGGTTGAAAAGGTTGAGGGCTCTTCAAGGAACTTCATGGAGCCAAAGCCGCAAAAGGCCATTACTAGACCAATTGAAAAGTTCCAAACAGAAGTATTGCCTCCAAAATCAGCTAAATCGATTCCTGTTACACACCATAAACTTTTGTCACCTATTAAGAATCCTGGCTTTGTTCCATCCAATAATGCTGCTTATATAATGGAGGCTGCAGCAAGAATTATTGAGCCTGGATCCCAAGCTAGTACCAAGTCCAAGACATCTATGGTAGCATCATCATCAACACCATTGAGAGTTAGAGATCTTAAAGATAAGGTGGAGGCTTCACAGAGAGGACCTCTAAATGGGCCATCCTCCGTGACCTCCAGAACTCGCGATCTAAAAGAGAGAAGAGAAATTTCTCAAAGAACAACCAGGCTCTCAGAATCTTCTCAAAGATCAGTCGAGTCAAATGCTGCTAAGTATCTAAAGGGCCAGCCTTTGAACAGAAGCTGGAATGGATCTGCGGATACATCATCCATCAAATCTCCTACAAATGAGGAAGAAGATTCCTCTTTGATGAATAAGGGGAAGTCCATTTCACTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGTTTGAATTTGACTGGTGGCAGAAGTTTAGCAGGCAAGAAAGAGCATCCTGATGTTAAATCCAACCAACCAACGAAGTCAAGTGTTCAGAAAAATTTACATAAGAAATCTTCTGGTCAGAATTCTTCTGGTGCTCTCAGACAGAATAATCTGAAGCAGAATTATTCAATTGACAAAGACAAATTACCATCAAAGCCATTGGTTACCAATTCACACAGTAGGAAAGCTCTGACCACAGATTCCTCTCATGGACGACATAGAAGCTCTACTAATAAATCCATTGCAAAATCTAAAGTTGGATCCAGAAAGTCAGCCACCGATAGTGAAAAGGAAGTCTTGTATACCAGCACAAACAATTTTCCTAGAAAGAAAAGGTCTACAGACAAGGACTGGAATGACAGGGTTGTGGATAATTTGTTCATTGAAAAAACTCAGAAGCCTGCTAAGTCCAACCTGGTGAGTAATAAACAAAATAGTTGGGCTGAAGATGATGGCAAAAAGAAAGACATGGATGTAGTTTCATTCACATTTACCACTCCATTAACTAGGAGCAATCCAGGTTTTGAGACATCTGGACTTACTGGCCACCAGAATAGTAATGGTCTTTCGTTGGATCAACGCATTAAAAGAGTGTTGCTTGATCCAGACAATACAAGGTCTCCAATAGGATACAATCTGATTGGTGGTGGTGATGCCTTAGGTATCCTTTTGGAACAGAAGTTGAGGGAATTAACAAATATGGAAGCCATTTGTCTTGATGACTCTTCTAAATTGATGCAACCTGCCATTACTGCACCAATGTCAGATGATCAAGTAACCAGCCTTAATGACTTCAATCCGAGGTTGCAACAGGAAAAAGACCAAGGTGTGTTATTTTCAGACAAGTTAAGCAGCAACTATGATTCAGACATCTCCTTCACTGGTCCTCCTGATATGTCATTGAAGCATAACTCCTCATGGATTGATGAGATTGAAACACAGTTACTCAATTGCAGACACCCGAGTCCAATCTCTGTTCTTGAGCCTTCCTTTTCAATTGAAAGCTGTGAATCTTCATTGAGCACAGATGTTACTAGTACAGAAGGAAACAAGTTGTACTCATCTGTTCCAGCTCAAGAAGTTCATGGCTTGAATTTTCCAAGGAAGTTCTATCCTTGTGAATCTGATGCAGAGTTATCTGACTCAGCTTCTTCAACATCAGCAGGGATCACAATGAGGAAGCACACAAGTACATTTTCGGTCACAAGGTTTGGAAGGTCAGGCACATTGGAGTTGGACTATGTGAAAGACATATTGTGTAATGTTGAGTTGATGTATATGGACTTTTCCCTTGGCCAAGCTAGTGAGATTATAAGCTCTCATCTATTCGAACAGTTGGAAGGCCGGAAGGGACGGTTTAACTGCGATGACGAGTCTAGGATGAGAAGGAAAGTTACATTTGATTGTGTGAGTGAGTGTCTGGATTTAAGATGCAGGGGTTATGTGGGGGGAGGATACAAAATGTGGCTCAAAGGGTTTGAAATGGTGAAAAGAAAAGAATGGTTGGCAGAAGATGTGTACAAGGAGATCTTGGGTTGGAGAGGAATGGGAGACTCAATGGTGGATGAGCTTGTGGACAAGGACATGAGCAGCCAATATGGAAGATGGCTAGATTATGAGGTTGATGCTTCTGAACTTGGATCAGAGGTTGTGGACCAAATTTTTAATTCTTTGGTTGATGATGTTGTCACTGAATTCTTGCAATTGTAA 2730 0.4114 MEEVMLVVFSSCLIGPQNPVRNYLQPSQNYQVDEDEIGVGASVRGSCDHSYASSVTDDEAYGTRPPSVVARLMGLDSLPHSSFSDPYSTPYFDTRSLQDSHYFKKNLGHQQHDLHTPYSGKLVEKVEGSSRNFMEPKPQKAITRPIEKFQTEVLPPKSAKSIPVTHHKLLSPIKNPGFVPSNNAAYIMEAAARIIEPGSQASTKSKTSMVASSSTPLRVRDLKDKVEASQRGPLNGPSSVTSRTRDLKERREISQRTTRLSESSQRSVESNAAKYLKGQPLNRSWNGSADTSSIKSPTNEEEDSSLMNKGKSISLAIQAKVNVQRREGLNLTGGRSLAGKKEHPDVKSNQPTKSSVQKNLHKKSSGQNSSGALRQNNLKQNYSIDKDKLPSKPLVTNSHSRKALTTDSSHGRHRSSTNKSIAKSKVGSRKSATDSEKEVLYTSTNNFPRKKRSTDKDWNDRVVDNLFIEKTQKPAKSNLVSNKQNSWAEDDGKKKDMDVVSFTFTTPLTRSNPGFETSGLTGHQNSNGLSLDQRIKRVLLDPDNTRSPIGYNLIGGGDALGILLEQKLRELTNMEAICLDDSSKLMQPAITAPMSDDQVTSLNDFNPRLQQEKDQGVLFSDKLSSNYDSDISFTGPPDMSLKHNSSWIDEIETQLLNCRHPSPISVLEPSFSIESCESSLSTDVTSTEGNKLYSSVPAQEVHGLNFPRKFYPCESDAELSDSASSTSAGITMRKHTSTFSVTRFGRSGTLELDYVKDILCNVELMYMDFSLGQASEIISSHLFEQLEGRKGRFNCDDESRMRRKVTFDCVSECLDLRCRGYVGGGYKMWLKGFEMVKRKEWLAEDVYKEILGWRGMGDSMVDELVDKDMSSQYGRWLDYEVDASELGSEVVDQIFNSLVDDVVTEFLQL 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0652 909 MobiDBLite consensus disorder prediction 331 439 - -
Aed4g0652 909 MobiDBLite consensus disorder prediction 199 215 - -
Aed4g0652 909 Pfam Domain of unknown function (DUF4378) 751 901 IPR025486 -
Aed4g0652 909 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 28 907 - -
Aed4g0652 909 MobiDBLite consensus disorder prediction 258 272 - -
Aed4g0652 909 MobiDBLite consensus disorder prediction 199 307 - -
Aed4g0652 909 PANTHER EXPRESSED PROTEIN 28 907 - -
Aed4g0652 909 MobiDBLite consensus disorder prediction 349 384 - -
Aed4g0652 909 MobiDBLite consensus disorder prediction 281 301 - -
Aed4g0652 909 MobiDBLite consensus disorder prediction 243 257 - -
Aed4g0652 909 Pfam DUF761-associated sequence motif 53 84 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0652 Aed-Chr4 5534008 5539904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0652 25 907 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 29.489 6.25e-81 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0652 - - gmx:100777900 1468.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0652 4 5534008 5539904 Aed4g0652 4 5534008 5539904 ECH
Aed6g2338 6 25242937 25246347 Aed4g0652 4 5534008 5539904 PCT