Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0651 ATGAAATTAAAATTTGTTGTGTACTTCGCATGGCCACCACACGGAGTTAGGTGGTCAGTGATAGCTGGACATTTACCAGGAAGAACTGACAATGAGATAAAGAACTATTGGAATTCTCATCTGAGGAGGAAGATCTATTGTTTCATGAGATCTCTTAATGAGTCTCTTCCACCATCCATTGACATGACTACAATATACTCTGCTAAAAGAGGTCGTGGTTCAAGAAACAAGACAACAATGGAAGAGGAAAAGAACATGGCTTTGAGCCAAAACTCCTTTGAGTCAATTCCTAGTTGCAACAGGGAAGAGGGTGAAGAAATTTCCATGATGGATGCTTGTTATGAAGTGCAGGGCAATGCAATTAGTAGCACATTTACATCATGCCCTGGTGTTGAAGGCTTGGGATTGGGACCATTTTATCAACATTGGTCTGATGATGAAATTATGAGACTTAGTAGTAACATGTTTGAAAATGGGGTGCTTGGTAATAATGTAACACTTAAGGAGGAGCTTAAGGGAAATGAATGTGGCCAAATGCATGTGGATTTAATGGAAGCAAGTCAAGAGAGCAAGAATAGTAACGGTGCTTGGAACTCATCAAATGAATGGTACCCCAATAGTTCATCAGTGATTGATTATCAGTGGTCTGATTGGGACATGGGAGGAAGTGTTCAATCCAATAATAATCAGTGGAACCTTTGTGATGACCAAGTGGTGAATTGCTTGTGGAGTGCCGACATTGGTGAAATAAATTATGGTTTTCACCCATGA 771 0.4008 MKLKFVVYFAWPPHGVRWSVIAGHLPGRTDNEIKNYWNSHLRRKIYCFMRSLNESLPPSIDMTTIYSAKRGRGSRNKTTMEEEKNMALSQNSFESIPSCNREEGEEISMMDACYEVQGNAISSTFTSCPGVEGLGLGPFYQHWSDDEIMRLSSNMFENGVLGNNVTLKEELKGNECGQMHVDLMEASQESKNSNGAWNSSNEWYPNSSSVIDYQWSDWDMGGSVQSNNNQWNLCDDQVVNCLWSADIGEINYGFHP 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0651 256 Gene3D - 11 45 - -
Aed4g0651 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 45 IPR017930 -
Aed4g0651 256 Pfam Myb-like DNA-binding domain 14 41 IPR001005 -
Aed4g0651 256 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 15 219 - -
Aed4g0651 256 PANTHER MYB TRANSCRIPTION FACTOR 15 219 - -
Aed4g0651 256 SUPERFAMILY Homeodomain-like 13 46 IPR009057 -
Aed4g0651 256 CDD SANT 14 41 IPR001005 -
Aed4g0651 256 ProSiteProfiles Myb-like domain profile. 14 41 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0651 Aed-Chr4 5533632 5534770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0651 15 250 MYB Transcription Factor Family AT5G49330 29.412 7.14e-17 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed4g0651 Myb_DNA-binding 6.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0651 K09422 - gmx:100819041 369.392