Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0643 ATGGCAAAGTCGAAGAATCACACAGCTCACAACCAGTCCTACAAGGCCCACAAAAACGGCATTAAGAAACCCAAGAGGCATCGCCACACTTCCACCAAAGGGATGGATCCCAAGTTTCTGAGGAACCAGAGGTATGCGAGGAAGCATAACAAGAAGAATGGTGAAATTGCCACCGAGGAAGATATTCCGCCAGAAGACGTGAAATGCATTGAAACTCCATTGTACAGGAAACTATGTAAAAGGAAAGGGGGTGACAGAGCAGAAGAACAGAGGGGACAGTTAGCCATGTGTACAAAAAAGAATGAAACAAGCAGCAGGTGA 321 0.4611 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNGEIATEEDIPPEDVKCIETPLYRKLCKRKGGDRAEEQRGQLAMCTKKNETSSR 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0643 106 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 - -
Aed4g0643 106 MobiDBLite consensus disorder prediction 81 106 - -
Aed4g0643 106 MobiDBLite consensus disorder prediction 81 95 - -
Aed4g0643 106 MobiDBLite consensus disorder prediction 1 32 - -
Aed4g0643 106 MobiDBLite consensus disorder prediction 1 59 - -
Aed4g0643 106 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 IPR002673 GO:0003735|GO:0005840|GO:0006412
Aed4g0643 106 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Aed4g0643 106 Gene3D - 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0643 Aed-Chr4 5475922 5482434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0643 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 83.607 8.01e-32 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0643 K02905 - gmx:100499874 129.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0643 4 5475922 5482434 Aed4g0643 4 5475922 5482434 ECH
Aed6g2329 6 25193273 25195664 Aed4g0643 4 5475922 5482434 PCT