Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0624 ATGGAAGTGAAAGGAAGAGTAAGCAACTCCACAATCCAAAGTGAGGATGAGATGGACCTTCGAAGAGGTCCTTGGACCGTTGATGAAGACCTTGCTCTCATTAATTACATTGCCAATCATGGGGAAGGTCGATGGAACTCTCTTGCTCGTTCAGCTGGACTCAAACGAACTGGCAAGAGCTGCAGATTGAGATGGTTGAATTATTTGCGTCCTGATGTTCGACGTGGCAACATCACACTCGAAGAACAGCTTCTTATTCTTGAGCTCCACGGTCGCTGGGGTAACCGATGGTCTAAAATTGCTCAATATCTGCCGGGAAGAACCGATAACGAGATTAAAAACTATTGGAGAACCCGTGTCCAAAAGCATGCGAAGCAACTCAAATGTGACGTGAATAGCAAGCAATTCAAGGATGCCATGCGCTACCTTTGGATGCCAAGGCTGGTGGAGCGCATTCAAGCCGCTGCGGCCGCAACCACCATTGTGACCGCTTCGGCCACGCGCTCCCCTACGGCATCTGCCAGTGTTACTACAACCATCACCAACAACAACACATACAACTACGACAACAACCTCAACAACAACAGCAACAGTTTTGAGGTGCACAGTGGGAACATGATGTTGAATCCAGCAATCATGAACAACAACAACTTTGGTGGTTCACACTGTTACACTCCAGAGAATAGTAGCACGGGTGCATCATCGGACTTGACTCACGATTATTACAATAATAATGTCACGGTTGGGAATAACAGCAATAACAACCATAACGCTAATCCTGATCAGTATTACCAACAAGCACATGAACAAATGAGTTTCTTAGACTGCATCACAAGCCCATCAGGGTCGTTGTTTCCTCAGGACCCGGATTTCCAATGGATTAATCAGAGTAATGGGGACACATCCAACGGTGGTTTCTGGAATGTTGAAAACATGTTGCTCTTCCAACAACTCAGCGACAACATGTGA 969 0.4634 MEVKGRVSNSTIQSEDEMDLRRGPWTVDEDLALINYIANHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHGRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDAMRYLWMPRLVERIQAAAAATTIVTASATRSPTASASVTTTITNNNTYNYDNNLNNNSNSFEVHSGNMMLNPAIMNNNNFGGSHCYTPENSSTGASSDLTHDYYNNNVTVGNNSNNNHNANPDQYYQQAHEQMSFLDCITSPSGSLFPQDPDFQWINQSNGDTSNGGFWNVENMLLFQQLSDNM 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0624 322 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Aed4g0624 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 73 IPR017930 -
Aed4g0624 322 SMART sant 74 122 IPR001005 -
Aed4g0624 322 SMART sant 21 71 IPR001005 -
Aed4g0624 322 CDD SANT 24 69 IPR001005 -
Aed4g0624 322 Gene3D - 19 75 - -
Aed4g0624 322 PANTHER MYB TRANSCRIPTION FACTOR 1 319 - -
Aed4g0624 322 SUPERFAMILY Homeodomain-like 19 116 IPR009057 -
Aed4g0624 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 124 IPR017930 -
Aed4g0624 322 CDD SANT 90 118 IPR001005 -
Aed4g0624 322 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Aed4g0624 322 Pfam Myb-like DNA-binding domain 75 118 IPR001005 -
Aed4g0624 322 Gene3D - 79 142 - -
Aed4g0624 322 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Aed4g0624 322 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 319 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0624 Aed-Chr4 5352083 5354420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0624 1 241 MYB Transcription Factor Family AT3G06490 63.934 4.48e-86 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed4g0624 Myb_DNA-binding 4.4e-15 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0624 4 5352083 5354420 Aed4g0624 4 5352083 5354420 ECH