Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0589 ATGGCAAATAGACACCATCATCCCTCAGTGTTTCTGGTGTTGGTTACTGTTTTACTTTCTATCCATTGCTCAGAGCAATTGCAATCCTCACACTCTCAGACTCTTCTCAGAATTCAGCAGCTACTGAACTTTCCTTCTGCTTTAAGCAACTGGAACAACAGCACAGACTTTTGCAACACAGATTCAAACTCTTCCCTCACTGTAGTGTGCTATGAAGACACCATAACACAGCTTCACATAATAGGTGAAAGAAGAGAAACACCTCTCCCTCGAAATTTCTCAGTAGATTCCTTTGTCACAACACTAGTAAGGCTTCCAAGTTTGAAAGTCCTCACATTGGTTTCTCTTGGTATATGGGGTCCACTTCCTAGTAAGATAGCTCGTTTGTCATCACTGGAAATTGTTAACATGAGTTCCAATTTCCTCTATGGTTCCTTTCCTCAGGAACTTTCATCGCTGTCAAATCTCCAAACACTTATCTTTGACAACAACATGTTGGCTGATGCTTTTCCTCATTGGATTGATTCACTTCAAGCCTTAACTGTGTTAAGTTTGAGGAACAACAAGTTCAATGGATCGCTACCGAATTCACTTGGTAATGTGGAGAATTTGAGAACTCTTTCACTTTCTCATAATCACTTCTATGGGGCAGTGCCGGATTTGAGCCGTTTGGCAAATCTTCAAGTGCTTGAATTGGATGATAATGCTTTTGGTCCTCAGTTTCCTCAGCTTGGTAACAAGTTGGTTACACTAGTGCTGAGAAACAACAGGTTCAGGTCTGGTATTCCTGCTGAATTGAGCTCATACTATCAGCTTGATCGATTCGATATCTCATCAAATTCATTTGTTGGACCATTTCAGCCAGGATTGTTGTCACTTCCTTCTATTACTTATCTGAATATTTCTGGGAACAAGTTAACTGGGATGCTTTTCGAGAATCTGTCGTGCAATTCTGAGCTTGATGTAGTAGATTTGTCCTCAAATCTTTTGACTGGGAGCTTGCCTAGATGTCTAGTGTCAAATTCCAGTGATGGCACTGTCCTGTATGCTAGAAATTGTCTAGACACTGCGAATCAGAATCAGCAGCCGCAGCCATTTTGTCACACTGAAGCCTTAGCTGTGGGAATATTACCTGAGAGAAAGAAGCACAAACAAGTATCTAAGGTAGTTCTTTCCCTTGGCATTGTAGGGGGAACTCTTGGAGGAGTAGCACTTGTTTTGTTAATTTTCTTTATTGTTAGAAGAGAAAATGACAGAAGCAAAACTAAGAATCCTCCAACAAGATTAATATCAGAAAATGCTGCTTCTGGTTACACATCTAAGTTGCTTTCTGATGCAAGGTATATATCTCAAACAAAGAAGTTAGGAGCAGTTGGCTTGCCAACCTATCGAAGTTTCTCATTGGAAGAGATTGAAGCAGCAACAAACTATTTTGATACAGCTTCTTTAATGGGTGAAGATTCTCATGGGAAGAAATACAGAGGCCAGCTGAAGAATGGCTCATTTGTTGCAATTCGGTGTGTGGAAATGAAAAAGAGATACAGCACTCAGAACTTTGTGCAACACATAGAGCTGATATCAAAACTCAGGCATCGTCATCTTGTCAGTGCTATTGGACACTGCTTTGAATGTTCTTTAGACGATTCAAGCGTCAGCAAAGTATTTCTAGTCTTCGAATACGTACCAAATGGCACGCTCAGGAATTGGATCTCTGATGAGCATGGTAAAAAATTCTTGAGTTGGACTCAACGCATAGGAGCAGCAATTGGAGTGGCAAAGGGAATCCAGTTTTTGCATACAGGGATTGTCCCTGGTGTATATTCCAATGGTCTCAAGATAGAAGATGTTTTATTGGACCAGAATCTTGTTGCAAAAATCACCAGTTATCACCTTCCTTTGTTATCTAACATGGGAAAGGGTCGGCATGGAAATTCTTTCAGTGGATTAAAAAATTCTAGCAATAATAAAAGTGTAAAGCATGAAGATAAGTCTGATATATACGACTTTGGAGTGATACTACTCGAACTCATTCTAGGAAGGCAAATAAAGACAGCAAATGATGCAGATGCTTTTAGGGATCTGTTGCAAGCAAGCTTAGGAGCTGATGAAGAGGGTAGGAGGAGCGTCATCGATCCAGCAATTCGCAAGGCATGCTTGGATCAATCATTGAAGACAATGATGGAGATTTGTGTGAGGTGCTTGATTAAGGAGGAGCCAGCAGATAGGCCCTCTGTAGAGGATGTTTTGTGGAACTTGCAATTTGCATGTCAAGTACAAGATGCATGGAGAGGGGATTCACAAAGTAGTACTGAAGGGTCACCAGGCTCAGAATCTCGAGGGCTACCCTACCATTAA 2355 0.4098 MANRHHHPSVFLVLVTVLLSIHCSEQLQSSHSQTLLRIQQLLNFPSALSNWNNSTDFCNTDSNSSLTVVCYEDTITQLHIIGERRETPLPRNFSVDSFVTTLVRLPSLKVLTLVSLGIWGPLPSKIARLSSLEIVNMSSNFLYGSFPQELSSLSNLQTLIFDNNMLADAFPHWIDSLQALTVLSLRNNKFNGSLPNSLGNVENLRTLSLSHNHFYGAVPDLSRLANLQVLELDDNAFGPQFPQLGNKLVTLVLRNNRFRSGIPAELSSYYQLDRFDISSNSFVGPFQPGLLSLPSITYLNISGNKLTGMLFENLSCNSELDVVDLSSNLLTGSLPRCLVSNSSDGTVLYARNCLDTANQNQQPQPFCHTEALAVGILPERKKHKQVSKVVLSLGIVGGTLGGVALVLLIFFIVRRENDRSKTKNPPTRLISENAASGYTSKLLSDARYISQTKKLGAVGLPTYRSFSLEEIEAATNYFDTASLMGEDSHGKKYRGQLKNGSFVAIRCVEMKKRYSTQNFVQHIELISKLRHRHLVSAIGHCFECSLDDSSVSKVFLVFEYVPNGTLRNWISDEHGKKFLSWTQRIGAAIGVAKGIQFLHTGIVPGVYSNGLKIEDVLLDQNLVAKITSYHLPLLSNMGKGRHGNSFSGLKNSSNNKSVKHEDKSDIYDFGVILLELILGRQIKTANDADAFRDLLQASLGADEEGRRSVIDPAIRKACLDQSLKTMMEICVRCLIKEEPADRPSVEDVLWNLQFACQVQDAWRGDSQSSTEGSPGSESRGLPYH 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0589 784 SUPERFAMILY Protein kinase-like (PK-like) 460 754 IPR011009 -
Aed4g0589 784 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 773 - -
Aed4g0589 784 MobiDBLite consensus disorder prediction 763 784 - -
Aed4g0589 784 Pfam Protein tyrosine and serine/threonine kinase 483 749 IPR001245 GO:0004672|GO:0006468
Aed4g0589 784 Gene3D Phosphorylase Kinase; domain 1 449 560 - -
Aed4g0589 784 SUPERFAMILY L domain-like 39 353 - -
Aed4g0589 784 ProSiteProfiles Leucine-rich repeat profile. 203 225 IPR001611 GO:0005515
Aed4g0589 784 Pfam Leucine rich repeat 154 214 IPR001611 GO:0005515
Aed4g0589 784 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 4 773 - -
Aed4g0589 784 Gene3D Transferase(Phosphotransferase) domain 1 561 768 - -
Aed4g0589 784 Gene3D Ribonuclease Inhibitor 247 354 IPR032675 -
Aed4g0589 784 Gene3D Ribonuclease Inhibitor 28 246 IPR032675 -
Aed4g0589 784 ProSiteProfiles Protein kinase domain profile. 478 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0589 Aed-Chr4 4991693 4998133 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0589 44 782 Miscellaneous Gene Families AT3G03770 61.642 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Aed4g0589 PK_Tyr_Ser-Thr 1.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0589 - - gmx:100807539 1418.68