Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0575 ATGGCAGCCTTCATCTCCAAGTCCAAGCTTCAATCCACAGTACTTGTTCTTGTCCTCAATTTGTGTTTCTTCTTCCTCTTCTGTCTCCTTCTAAAGGCTTATCACAACAGCTCAAACTCTCATGATAAGGGTCAGTACTCAAATAATGGCCCTCTCAGAATCTTCAACCATGCAAGGCTTTTCAGAGATGTTAGTGTTGAAGGCTGCACTGATCTCCACAATTACTCAGACTACGAATCCAAGTGTTTCTATGTGAAGACCCATCTTGATTGCAGGTCAAAAGGGTACATAAACTATCTCCAAATCTTCTACTGCACCTTTGGGAAATTCCAAATCTTGGGACAGACCCTCCTAGCCTTGTGGCTTGTGGTGCTGTTCTACCTTCTGGGGGACACAGCCTCCAACTATTTCTGCAGCTCCTTGGAGGGCTTGTCCAACATCTTGAGGCTCTCCCCCACCATTGCAGGTGTCACACTCCTCTCTCTTGGGAACGGTGCTCCTGATTTCTTTGCCAGTGTTGTTTCCTTCACAGGACCATCAAACAACGGTGCTGTTGGACTCAACAGCATCCTCGGAGGGTCCTTCTTTGTGTCATGTGCTGTCTTGGGGATCATAAGCATTCTGGTTGGCCCAAATCAGGTTCAAGTTGATAAAGCTAGTTTCATAAGGGATGTGTTATTCTTCCTTTTCTCACTCCTCATCCTCCTTATCATACTTTACATTGGTAAAATCACTTTGTTGGCTTCAATCTGCTATGTTTCAATCTACTTTCTCTATGTATGTGCTGTCTCAGCCACACATCTTATCTATGGAGGAAACAGAATCAATCAAAGGAACCAATACTCATCTGATTCTGATCATGATCAGTCACTAGAGACTAGCACACCTTTGTTAGGCTATGTTGATGAAGAGAAACCTAGTTTGGCAGAGATAGTTGTGGTTGAAATTGAAAACAACAAGAACCAAAAGCCAGATACTACTACTAGTGATAGTAATAGTAGTAATAGGTTTGATTGTGTTTACTTGAGAAAGTTGTTACAAGTGCTAGATTTACCACTTTGCTTGCCAAGGAGGTTAACAATTCCTGTGGTGAGTGAAGAGAAATGGTCAAAGCCATATGCAGTGATATCAGTGACACTAGCACCAATTCTGTTGGCAATTCTATTCAACACACAACAACAAAGTGAAAACGTGGGTTCTTCTTCTAAGAGCAGCATTGTGACATACATCATAGCTGCATTGATTGGGATAATTTTGGGAAACATGGCATGCGTGACAACCGAAAAGTGCACCCCACCAACAAAAACCTTGTTCCCATGGCTAGCTGGTGGGTTCGCAATGAGTGTAACATGGACATACATAATAGCAGAGGAGCTTGTTTCACTCTTGGTCTCAATCGGGAGCATCCTAGGGGTCAGCCCTTCGATTTTAGGACTAACCGTCCTTGCTTGGGGCAACTCGCTTGGGGACTTGATAGCGAATGGGGCAATGGCGGTGAACGGTGGGCCTGATGGGGTGCAGATGGCAATCTCGGGATGCTACGCAGGCCCAATGTTTAACACCTTAATGGGCTTAGGCCTACCACTTGTTCTCTCGGCCTGGTCGGAGCATCCCGAGCCTTATGTGACTCCTAAGGACTCTTCGGTTTATGAGACGCTTTTGTTCTTGATGGGAGGGGTGCTTTGGGCATTTGTGATTTTGCCTAGGAAGAATATGAGAATGGATAAATCCTTGGGAGCAGGGCTATTGAGTGTTTATCTATGCTTTTTGGTTATAAGGATTGCTATGGCAGTTGGGATTGTCAAATTCTAG 1812 0.4443 MAAFISKSKLQSTVLVLVLNLCFFFLFCLLLKAYHNSSNSHDKGQYSNNGPLRIFNHARLFRDVSVEGCTDLHNYSDYESKCFYVKTHLDCRSKGYINYLQIFYCTFGKFQILGQTLLALWLVVLFYLLGDTASNYFCSSLEGLSNILRLSPTIAGVTLLSLGNGAPDFFASVVSFTGPSNNGAVGLNSILGGSFFVSCAVLGIISILVGPNQVQVDKASFIRDVLFFLFSLLILLIILYIGKITLLASICYVSIYFLYVCAVSATHLIYGGNRINQRNQYSSDSDHDQSLETSTPLLGYVDEEKPSLAEIVVVEIENNKNQKPDTTTSDSNSSNRFDCVYLRKLLQVLDLPLCLPRRLTIPVVSEEKWSKPYAVISVTLAPILLAILFNTQQQSENVGSSSKSSIVTYIIAALIGIILGNMACVTTEKCTPPTKTLFPWLAGGFAMSVTWTYIIAEELVSLLVSIGSILGVSPSILGLTVLAWGNSLGDLIANGAMAVNGGPDGVQMAISGCYAGPMFNTLMGLGLPLVLSAWSEHPEPYVTPKDSSVYETLLFLMGGVLWAFVILPRKNMRMDKSLGAGLLSVYLCFLVIRIAMAVGIVKF 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0575 603 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 5 603 - -
Aed4g0575 603 PANTHER CATION/CALCIUM EXCHANGER 1 5 603 - -
Aed4g0575 603 Pfam Sodium/calcium exchanger protein 441 594 IPR004837 GO:0016021|GO:0055085
Aed4g0575 603 Pfam Sodium/calcium exchanger protein 119 262 IPR004837 GO:0016021|GO:0055085
Aed4g0575 603 Gene3D - 373 596 IPR044880 -
Aed4g0575 603 Gene3D - 150 281 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0575 Aed-Chr4 4819204 4821015 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0575 72 602 Antiporters AT5G17860 50.847 6.26e-175 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0575 K13754 - gmx:100811635 929.472