Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0568 ATGCTTCCAGGCGCTAATGTTGAGCATGATTCACACAGCGAAGATGATGAATCAGAAACTCTGTCTGATATTGATGATGAAGAGGTTGACATGTACCTTAACAACGAGGAGGAGAAGCATCTCAAGAAGATACTGTGGGAAAGAGCTAACCGAGACTATCTTCAGGAACAGGTAGCCAAGGAACAACCAGCTAATAAGAAAGCATCTACTTCTGAAACTGTGGCAAAATCCAGAAAGGAAATGAAACAAAGACGGGCTCGTGAAGCACAAAATATAGTGCAAGCTCAATCTTCTGCAGAGGCCTCTGACAAAACAAGGTCTCTCAAATGTAGTAGAGTCAATCATGATCGCCTAAGTCAATTTTTGAATCAAATGAATGAAGTTGAGATGGAACAAGCGGATGAATTTGGATATGAAGGTGGTGATATAGTTGAAATACGTGTTTCTAATGAAAAACATTGA 462 0.4004 MLPGANVEHDSHSEDDESETLSDIDDEEVDMYLNNEEEKHLKKILWERANRDYLQEQVAKEQPANKKASTSETVAKSRKEMKQRRAREAQNIVQAQSSAEASDKTRSLKCSRVNHDRLSQFLNQMNEVEMEQADEFGYEGGDIVEIRVSNEKH 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0568 153 MobiDBLite consensus disorder prediction 72 87 - -
Aed4g0568 153 Gene3D Single helix bin 15 64 - -
Aed4g0568 153 MobiDBLite consensus disorder prediction 57 108 - -
Aed4g0568 153 Pfam Brf1-like TBP-binding domain 22 120 IPR011665 -
Aed4g0568 153 PANTHER TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT 11 123 IPR029529 GO:0000126|GO:0000995|GO:0006383
Aed4g0568 153 MobiDBLite consensus disorder prediction 17 32 - -
Aed4g0568 153 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 11 123 IPR000812 GO:0006352|GO:0070897
Aed4g0568 153 MobiDBLite consensus disorder prediction 1 33 - -
Aed4g0568 153 MobiDBLite consensus disorder prediction 89 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0568 Aed-Chr4 4759654 4761452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0568 28 105 Inorganic Solute Cotransporters AT2G01280 34.091 1.86e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0568 K15196 - gmx:100789154 114.775