Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0564 ATGAAGAACATAATATTAATCCTTTTGTTTTGCATCATAATATTTCCCCTGGCATTCGCGGAGTTGAAGGTTGGATTTTATGGCTCTTCATGTCCAAAAGCTGAGTCTATTGTGAAGAAAGTGGTACAGGATCGATTCAATCGTGACAAGTCCATTACTGCAGCCTTGCTTCGCTTGCATTTTCATGACTGTGCTGTCAGAGGTTGCGATGCATCCATACTCATAAACTCCACTAAGGCCAATACGGCAGAGAAAGATACAGGCACAAACGACAGCGTTCGGGGATACGACCTCATTGACGAAGCAAAGCAAACCCTTGAAGCTTCATGTCCTTCAACCGTGTCATGCGCAGACATCATAACCCTAGCGACTCATAAAGGCATCACGACGCAGGAAATGGTGACCCTCTTCGGAGCGCACACTGTCGGCGTCGCGCACTGCGGTTTCTTCGCGGGTAGGCTCTCGAGCTCGAAGCCTGACCCTACAATGGACCCTGCGCTGAATGCTAAGTTGTTGAAGTTGTGCGGCTCTGGAGGGAATCCCACTACGCCGTTAGATCAGAAGACTGTTTTTGCTTTTGATAACGAGTTCTACGGTCAGATTCTTGCAAAGAGAGGGGTGTTGCAGATTGATCAGCAGCTTGCGTTGGATGCGAATACGAAAGGGTTTGTGACGGATTTTGCTGCGGATGGTGATAGGTTCCAGAAGGGTTTCACGAATGCGATTGTGAAGATGGGAAGGATTGATGTTCTGGTTGGGAATCAAGGGGAAATCCGCAAGAAATGCTCGGTTTTCAATAAGTTATGA 807 0.4746 MKNIILILLFCIIIFPLAFAELKVGFYGSSCPKAESIVKKVVQDRFNRDKSITAALLRLHFHDCAVRGCDASILINSTKANTAEKDTGTNDSVRGYDLIDEAKQTLEASCPSTVSCADIITLATHKGITTQEMVTLFGAHTVGVAHCGFFAGRLSSSKPDPTMDPALNAKLLKLCGSGGNPTTPLDQKTVFAFDNEFYGQILAKRGVLQIDQQLALDANTKGFVTDFAADGDRFQKGFTNAIVKMGRIDVLVGNQGEIRKKCSVFNKL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0564 268 Pfam Peroxidase 38 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g0564 268 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0564 268 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0564 268 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0564 268 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0564 268 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Aed4g0564 268 Gene3D Peroxidase, domain 2 126 245 - -
Aed4g0564 268 CDD secretory_peroxidase 21 265 IPR033905 GO:0004601|GO:0042744
Aed4g0564 268 SUPERFAMILY Heme-dependent peroxidases 21 266 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed4g0564 268 PANTHER PEROXIDASE 44-RELATED 13 125 - -
Aed4g0564 268 PANTHER PEROXIDASE 44-RELATED 125 264 - -
Aed4g0564 268 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g0564 268 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g0564 268 PRINTS Haem peroxidase superfamily signature 132 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g0564 268 PANTHER PEROXIDASE 25-RELATED 13 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0564 268 Gene3D - 246 266 - -
Aed4g0564 268 PANTHER PEROXIDASE 25-RELATED 125 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0564 268 Gene3D - 25 125 - -
Aed4g0564 268 ProSiteProfiles Plant heme peroxidase family profile. 21 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0564 Aed-Chr4 4711421 4713585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0564 1 266 Peroxidase AT4G26010 47.771 1.11e-94 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0564 K00430 - gmx:100777946 425.631