Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0563 ATGAAGTTCACCAATATTCTTATTTTGTTGTTCTTTGTGTTTCCCATTGCATTTGCTGATCTGAGGTTTGGGTTCTACACCTCTACATGCCCAAGAGCAGAGCAAATTGTACGACAAGTTGTTCAGAGAAGATTCAACCGCGATAAATCCATTACTGCTGCCTTGCTTCGCATGCACTTCCATGACTGCTTTGTGAGAGGTTGTGATGCATCAATATTAATAGACTCGAGTAGGGACAATCAATCTGAGAAAGCTTCAGGCGCAAACGGCACCGTTCGAGAGTTCGAGCTCATAGACGAAATAAAAAAAAACTTAGAACAAGAATGTCCCACAACGGTCTCATGCGCTGATATAATAACACTCGCCACACGAGATTCCGTGGGCATGTCAGGTGGGCCAAAATACGACATCGCAACAGGAAGACGCGACGGGCTTATCTCACTATCCTCCGAAGTGAACCTTCCCGGGCCGGGTTCCACTGTGTCGCAGGCTTTGGAGGCCTTCACCGCAAATGGCATGTCGTTGGATGAAATGGTCACGCTTCTAGGGGCCCACACCGTGGGTTTCGCGCACTGCAGTTTTTTTCAAGATAGGCTGAACGACTCCAACATGAACTTTTCTTTGCGAGCCCAGTTGAACCAAGTATGTAGCAAGCCCAACGATCCAACTACTTTTCTAGACCAAAACGCATCGTCATCAATGGTGTTCGACAATGCGTTTTATAAACAAATTATTTTAAAGAGAGGGGTGCTTTTCATTGACCAACAATTGGCATTGGACACTTCTTCCAAAGGGTTGGTCTCAACTTTTGCAAGGGATAATGCGGCTTTTCAAAGGAGTTTTGGTGAGGCTATGATCAAGATGGGGAGCATTAGGGTTTTGGTAGAGAGTGATGGAGAGATTAGGAGAAATTGTAGGGCTTTTAATAGAGCTTCTTAA 939 0.4515 MKFTNILILLFFVFPIAFADLRFGFYTSTCPRAEQIVRQVVQRRFNRDKSITAALLRMHFHDCFVRGCDASILIDSSRDNQSEKASGANGTVREFELIDEIKKNLEQECPTTVSCADIITLATRDSVGMSGGPKYDIATGRRDGLISLSSEVNLPGPGSTVSQALEAFTANGMSLDEMVTLLGAHTVGFAHCSFFQDRLNDSNMNFSLRAQLNQVCSKPNDPTTFLDQNASSSMVFDNAFYKQIILKRGVLFIDQQLALDTSSKGLVSTFARDNAAFQRSFGEAMIKMGSIRVLVESDGEIRRNCRAFNRAS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0563 312 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Aed4g0563 312 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Aed4g0563 312 ProSiteProfiles Plant heme peroxidase family profile. 20 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g0563 312 Gene3D - 25 309 - -
Aed4g0563 312 PANTHER PEROXIDASE 44-RELATED 12 307 - -
Aed4g0563 312 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0563 312 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0563 312 PRINTS Plant peroxidase signature 283 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0563 312 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0563 312 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0563 312 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0563 312 PRINTS Plant peroxidase signature 227 242 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0563 312 PRINTS Plant peroxidase signature 243 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0563 312 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0563 312 Gene3D Peroxidase, domain 2 155 288 - -
Aed4g0563 312 PANTHER PEROXIDASE 25-RELATED 12 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0563 312 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g0563 312 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g0563 312 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g0563 312 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g0563 312 PRINTS Haem peroxidase superfamily signature 229 244 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g0563 312 SUPERFAMILY Heme-dependent peroxidases 20 309 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed4g0563 312 CDD secretory_peroxidase 21 308 IPR033905 GO:0004601|GO:0042744
Aed4g0563 312 Pfam Peroxidase 37 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0563 Aed-Chr4 4708680 4709938 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0563 3 309 Peroxidase AT4G26010 57.143 2.41e-127 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0563 K00430 - gmx:100820340 498.819