Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0562 ATGGAAGATCAGCATCAGCAGCAGCATCATGAGGAGGCAGAAACAAAGGGTCCATTAAGGCAGCAACAGCAGCAGGGCCCAGAGAGGAGCGAAGCGGTTCGGTCGAGGTGGACTCCAAAGCCGGAGCAAATCCTGATTCTTGAGTCCATCTTCAACAATGGCATGGTGAACCCACCAAAGGATGAGACCGTCCGGATTAGGAAGGTTCTTGAGAAATTCGGCGCTGTCGGCGATGCTAACGTCTTCTACTGGTTCCAGAACCGCCGCTCGCGGTCCCGTCGCCGACAGCGCCAGATGATGCAACAACAGCAACAGCAGCAGGCGGCCGCTGCTGCTGTTGCCACCACCATCAACCACCCCCTGCTGCCTCAGCCTCACCCCCACCCCCAGGCGCAAGCTCAGGATATGGTTGGTGGTGGTGCAATTTCACATGATCACCACAACCACAACAACATTCAGGGGAACAACGTTGTTGCTACTAATTCAACCATGGGTTTGGGTTTTGGTTGCTCTCCATGTTTTGATCTTTTCCTTGGTTCATCTTCATCTGGCGGTAGCAGCGGTGGCAGTGGTGGCCAACAGGGCATGGATGATTTCTTCTCAGTTTCTCCTCAATTGGGTTTCCCTCATCAACCAATTGACCACACTTCACCAGCATCATCAGTTTTGTACCCTCCTCTTGATCCAAATTTCAGCTACCACCCTGGATATGGAAGCACTAATATTTCAGGATTCATCACAGTGTTTATCAATGGGGTTGCAACAGAACTTCCAAAGGGGCCAATAGACCTCAAGACCGTATTTGGAGACCATGTAATGTACCAAAGCCAACATAAGGATGCAATGGAAGCTTCCTTTTCGTGA 864 0.5116 MEDQHQQQHHEEAETKGPLRQQQQQGPERSEAVRSRWTPKPEQILILESIFNNGMVNPPKDETVRIRKVLEKFGAVGDANVFYWFQNRRSRSRRRQRQMMQQQQQQQAAAAAVATTINHPLLPQPHPHPQAQAQDMVGGGAISHDHHNHNNIQGNNVVATNSTMGLGFGCSPCFDLFLGSSSSGGSSGGSGGQQGMDDFFSVSPQLGFPHQPIDHTSPASSVLYPPLDPNFSYHPGYGSTNISGFITVFINGVATELPKGPIDLKTVFGDHVMYQSQHKDAMEASFS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0562 287 Gene3D - 34 101 - -
Aed4g0562 287 MobiDBLite consensus disorder prediction 184 203 - -
Aed4g0562 287 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 274 IPR044558 GO:0003700|GO:0048830
Aed4g0562 287 MobiDBLite consensus disorder prediction 1 37 - -
Aed4g0562 287 SUPERFAMILY Homeodomain-like 28 101 IPR009057 -
Aed4g0562 287 SMART HOX_1 32 99 IPR001356 GO:0003677
Aed4g0562 287 MobiDBLite consensus disorder prediction 1 17 - -
Aed4g0562 287 MobiDBLite consensus disorder prediction 184 200 - -
Aed4g0562 287 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 274 - -
Aed4g0562 287 ProSiteProfiles 'Homeobox' domain profile. 30 95 IPR001356 GO:0003677
Aed4g0562 287 Pfam Homeodomain 34 94 IPR001356 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0562 30 270 Wox Gene Family AT5G17810 44.882 2.84e-44 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aed4g0562 Homeodomain 6.6e-13 CL0123