Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0535 ATGGGTAGCAGAAGTAGAACGCTGAACGTTAACACTAACAACACTAACAAGGTTCTGAACGGGACCATGCCAAGCTACGCTCCTCCATTGCCATCTTCTTCTAATTCCATGGCCATAGAAGCAACTAATGTTCATCCTTCCCGCATTTCTGAATTTGGAACCCTGGAGCAATCTCTTGGATATCGCATTGAAGATACCATTAATCTTAGCAGAAATCCAGTGTTTAATCAAATGAAATCAAATAGCCAAGCTCTAGGTGCTGATATTCAATTTGGTGCTTTAAATAAGATGCAGTCAATTGCAACATCGGATATAAACCTCTCCGCCGTGATTGCCGGGTCTCAGCCATTGGTATTACAAAAAGATTCACAACCAAATCTGACTTCGACATCTACTGGTCATCGTGAGAATTGGGGAGAGACCAACATGGCTGATGCTAGCCCAAGGACTGATACTTCAACAGATGACACAGAAGACAAAAATCAAAGGCCTGAAAGGGGTGAATCCAGTGGATCAAAAGATAAATCAGATCAAAAGACATTAAGACGGCTTGCTCAAAATCGTGAGGCTGCCAGGAAAAGCCGACTGAGGAAAAAGGCATATGTGCAACAATTAGAGAGCAGTAGGCTGAAACTGACCCAACTTGAGCAGGAGCTCCAGCGAGCTCGCCAGCAGGGAATATTTATTTCAAGCACTGGAGATCAGGCCCAGTCAATGAGTGGAAATGGCGCTATGGCATTTGATGTAGAGTACGCGCGATGGTTAGAAGAGCATAATAGGCAAACCAATGAGCTGAGGGCTGCAATTAATTCTCATGCTGGAGATATTGAACTTCGTACCATTGTTGACAATTTCATGACACAATTTGATGATATCTTCAGGCTGAAAGGTAATGCGGCAAAAGCTGATGTTTTCCACATTCTGTCAGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGTTTTCGCTCATCCGAACTCCTAAAGCTTCTTGTGAGTCAGTTGGAGCCTTTAGCTGAGCAACAATTGATGGGCATCTACAACTTGCAGCAGTCATCTCAGCAGGCTGAAGATGCTCTTTCCCAAGGGATGGATGCACTGCAGCAATCACTGTCTGAGACATTGGCTAGTGGCTCGCCGAGTTCGTCAGGCTCCTCAGGAAATGTGGCAAATTACATGGGGCAAATGGCTATGGCCATGGGAAAGCTTGGTACTCTCGAGGGGTTTCTTCGCCAGGCTGACAATCTGCGGCAGCAAACATTACAACAAATGCTTCGTATATTAACGACCAGGCAGTCGGCTCGAGCTCTTCTCGCAATAAGTGATTATTTCTCGCGACTGCGAGCGCTGAGTTCTCTGTGGCTTGCCAGGCCAAGGGAGTGA 1395 0.4588 MGSRSRTLNVNTNNTNKVLNGTMPSYAPPLPSSSNSMAIEATNVHPSRISEFGTLEQSLGYRIEDTINLSRNPVFNQMKSNSQALGADIQFGALNKMQSIATSDINLSAVIAGSQPLVLQKDSQPNLTSTSTGHRENWGETNMADASPRTDTSTDDTEDKNQRPERGESSGSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSTGDQAQSMSGNGAMAFDVEYARWLEEHNRQTNELRAAINSHAGDIELRTIVDNFMTQFDDIFRLKGNAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVSQLEPLAEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLSETLASGSPSSSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0535 464 CDD bZIP_HBP1b-like 179 231 - -
Aed4g0535 464 MobiDBLite consensus disorder prediction 151 181 - -
Aed4g0535 464 MobiDBLite consensus disorder prediction 121 150 - -
Aed4g0535 464 ProSiteProfiles DOG1 domain profile. 244 461 IPR025422 GO:0006351|GO:0043565
Aed4g0535 464 Gene3D - 178 230 - -
Aed4g0535 464 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 182 197 IPR004827 GO:0003700|GO:0006355
Aed4g0535 464 Coils Coil 198 225 - -
Aed4g0535 464 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 177 221 IPR004827 GO:0003700|GO:0006355
Aed4g0535 464 SMART brlzneu 175 238 IPR004827 GO:0003700|GO:0006355
Aed4g0535 464 Pfam Basic region leucine zipper 175 221 IPR004827 GO:0003700|GO:0006355
Aed4g0535 464 SUPERFAMILY Leucine zipper domain 179 222 IPR046347 GO:0003700|GO:0006355
Aed4g0535 464 PANTHER TRANSCRIPTION FACTOR TGA9 63 464 - -
Aed4g0535 464 MobiDBLite consensus disorder prediction 1 22 - -
Aed4g0535 464 MobiDBLite consensus disorder prediction 121 181 - -
Aed4g0535 464 PANTHER TGACG-SEQUENCE-SPECIFIC DNA-BINDING PROTEIN TGA-2.1 63 464 - -
Aed4g0535 464 Pfam Seed dormancy control 262 337 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0535 Aed-Chr4 4405803 4412431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0535 143 464 bZIP Transcription Factor Family AT3G12250 74.622 1.13e-172 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed4g0535 DOG1 4.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0535 K14431 - gmx:778136 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0535 4 4405803 4412431 Aed4g0535 4 4405803 4412431 ECH