Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0505 ATGGGGATGGCTGCTGCAGAGTCACAGTTTCATGTCTTGGCTGTTGATGACAGCATCATAGATAGGAAACTCATTGAGAGGCTCCTCAGAACCTCTTCCTACCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTGGAGTTTCTGGGGTTGCGTGAGAATGATGCCAGCAACCCAAGTACACCATCTGTTTGTCACAACAATCATCAGGAGGTGGAGGTGAATCTTGTTATAACAGATTACTGTATGCCTGGCATGACAGGCTATGACTTGCTTAAGAAAATCAAGGAATCTTCATCTTTGAGAAACATACCAGTGGTGATTATGTCATCTGAGAATGTGCCTTCAAGGATTAACAGATGCTTGGAGGAAGGAGCAGAAGAATTTTTCTTGAAGCCTGTGAGGCTGGCAGATTTGAACAAGCTTAAACCACACATGAAGAAAACCAAGTTGAATGATCAAAATCAAGAAACAATAGAAAAGCTTGAAAACTCAGAAGTTCAACAGCAACAAATCATCATCCAAAATGAGCAGCAACAAGCACCAAAATCCCAAGATCCTCTTCAGCCAGAGTCAGAGTCACAACATCCACAACCAACTATTGAACAACAGCAACAATCACTACAACAAGCCAACAACAGCAATAACAAGAGGAAGACCTTGGAACAGGGCCTTTCACCTGAGACTGACAGAACAAGACCAAGATACAGTGGCATAGCCACTGTGGTATGA 732 0.4276 MGMAAAESQFHVLAVDDSIIDRKLIERLLRTSSYQVTTVDSGSKALEFLGLRENDASNPSTPSVCHNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLADLNKLKPHMKKTKLNDQNQETIEKLENSEVQQQQIIIQNEQQQAPKSQDPLQPESESQHPQPTIEQQQQSLQQANNSNNKRKTLEQGLSPETDRTRPRYSGIATVV 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0505 243 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 239 IPR045279 GO:0009736
Aed4g0505 243 Gene3D - 11 233 - -
Aed4g0505 243 SUPERFAMILY CheY-like 9 165 IPR011006 -
Aed4g0505 243 SMART REC_2 10 143 IPR001789 GO:0000160
Aed4g0505 243 MobiDBLite consensus disorder prediction 177 243 - -
Aed4g0505 243 ProSiteProfiles Response regulatory domain profile. 11 147 IPR001789 GO:0000160
Aed4g0505 243 Pfam Response regulator receiver domain 12 141 IPR001789 GO:0000160
Aed4g0505 243 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 2 239 - -
Aed4g0505 243 CDD REC_typeA_ARR 12 142 - -
Aed4g0505 243 Coils Coil 148 168 - -
Aed4g0505 243 MobiDBLite consensus disorder prediction 177 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0505 Aed-Chr4 3872243 3875170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0505 1 243 Response Regulator Gene Family AT3G57040 63.934 1.19e-97 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed4g0505 Response_reg 8.8e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0505 K14492 - gmx:100814494 382.104