Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0500 ATGGTTGCTTTGTTTTCTCCTCCATTGTTCTCAAGCAAGGGATGGCTCTTAGAAGAGGAGCCATTAAGCTATGATGTGTTTCCTTATCAATTTTATGCACCACAGACACAAATTGAGAAAAAAATGAGTATTCCGGTTACAGTTTCGCGAGTATTAAAATACATACCCGAGTTACAGCACCAAGTGCAAGCACTAACTAAGAAAAAAGAGGAGTTACTGTGTAGAATTTCTGAGCAATTGCAAGGAGATACAATAGCGAACAAAGAATCTCAAAGGAGGAGAATTTCGCAGCACAACTCTGATTTTGTTGTTTCAACAATTAGGCTCAATGATTGTGAAGCTGTTGTTCACATTTCCTCTTATGAGGCTCCACTATCTGAGATCTTGCAATGTTTAGAAAATAATGGCCTTCTTCTGCTGAATGCTTCTTCTTCTGAAACCTTTGGAGGAAGGGTCTTCTACAATTTGCATTTTCAGGTGGAAAAAACTCATAGATTAGAGCCCGAGATTCTGACTGAGAAGCTTTTGTCAATATATGAAAAGCAAAGGATTTTCTAA 558 0.3799 MVALFSPPLFSSKGWLLEEEPLSYDVFPYQFYAPQTQIEKKMSIPVTVSRVLKYIPELQHQVQALTKKKEELLCRISEQLQGDTIANKESQRRRISQHNSDFVVSTIRLNDCEAVVHISSYEAPLSEILQCLENNGLLLLNASSSETFGGRVFYNLHFQVEKTHRLEPEILTEKLLSIYEKQRIF 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0500 185 Coils Coil 55 75 - -
Aed4g0500 185 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 34 181 IPR015660 GO:0003700|GO:0006357
Aed4g0500 185 PANTHER TRANSCRIPTION FACTOR ORG2-RELATED 34 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0500 Aed-Chr4 3836372 3837628 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0500 34 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 41.830 2.25e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0500 - - gmx:100790212 288.5