Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0495 ATGAAGGTTGAAGTTGAAGGCAACCACAGTGATTATGATGATTCTCAAACAGTGTCTGGAACAGATGAATCTGTTTCAAGCCAATCAGAAAAAAGAGGAAGATTGGAATCCAAGAAGAAACTGAAGAAAGTGAGGTCAATAAGGCTGGTAAGATTCCCAAGCAAAAGATCATCCACCAGAGAAAATTTAGAACCACTTTACATGGCAGAGGCATCACCCAATTACATGAAGGCTACCACCAGTTCTCATGCAAAGGATAGTTTTCAGAAAACACAAAGACTATTCACAAAGAAGACTTTGACAAGAATGTCTACTTCTTTGAAACTGAAGAGGAGTCTGACCAGAAAGTTATCTGGAAGGACTGAACCAAAGAGGAAACTGAAGCCCTCAAGATCAATCAAGTTTGCAACTTTCAAGGGCCAAAAATCAATAAGAAACTTTTCTGAATCTAGTTATGGAAGTGATGCTGCTAACAAACCTCTGAGAGTCATGACCAGAAGGTTAAGCTTCAAGCCTGTGAGGATCTTAGCAAAGATGGCCACTTTCAAATCCTCCGACACAAGCTTGCATAGAGCCACTTGTTCTTCTGCAATCAAGGATTCTCATTTTCCTGATCACATTGACCTCCCTCAAGAGGTTTGTTCATATTCTTACTGCTCACTCCATGGTCACCGCCACCACGCCAATCTGCCTCCACTGAAGCGGTTTGTTTCATTGAGGAGGCGCGCGTTGAAGAGCCAAAAGCCGACGAAAACGGATCGTCAACCTGTTTCTAGACCAAAGAAGATTGGTAATGCAAAGAGAGTCACTCAGAAAACTCAAACTTTCCACAGTGAAGATGGAAAATCTCATTTTGAGAACAAGAAAAAGCCAGCAAGGGGCTTATGGATTAAGCCTCATGGCACTCCAACATCAACAGATGAAGTTGAGTTTTCTGCTACTGATACTGAGATATTGGAGGGAGAAGTAACCAACACTGGCAACACAAGCAAAAATATGGAGCCGGATTATGAAGTACAGAAAGAATCTAAACATGCCAGCTCTATTGATTTGGCAAGTGCAATGCAGGAAAGAGATAAAAAATATGTCAAAATGTGGAAGTTAATGTATAAGCATGCTGTGTTGAGTAACACAGTTGAAAATAAGCAGCACTTTGATGGGAAAGACAAGGAAGGAAGAGAGCAAGATTCCCTTGCAACTAATGAAGTGAACAACAATTCTTCTTGTCGTGATGATTGCGATACAGACCAGGATATGGATGATGATGAAAATAAGAATAATGCAATTGAGCTGGTGCAGAAAGCATTTGATGAAATCCTTCTTCCAGAGCCTGAAGACCTCTTTTCTGATGAACAATTCAAATCTGAAGGCATTGATTCAGATGAGGTAGAGTTAGAAAAGAGTGATGCTGACAGAGAAAGGAATATCTCATCATCCTCAGAATCTCCAATAGCACAGAGGATGGGGATCAAACCTGACCAAAGAGCACCAAAAAGCTGGAGCAATCTGAAAAAGCTAATCCTCTTGAAAAGGTTTGTGAAGGCGTTAGAGAAGGTAAGAAACATCAATCCCCAAAGACCGAGACGTTTTTCTTCTGATGCCAACTTAGAAATGGAAAAGGTCTTTCTCAAGCACCAAACAGCAGAAGATAAAAAGAATGCTGAGGAATGGATGCTTGATTATGCACTTCAAAAGGTTGTTTCTAAACTTGCACCTGCTCAAAGACAAAAAGTGACACTTCTAGTAAAAGCTTTTGAAACAATTCTGCCATTTCAAGATGCTGAAAATAGTCCATGGTTTTCTGCAACGATGGAACCTCAGGCAAATCCAGTTCAACCCCTTGATGATTCCTCAAATCATAGTGAGGAAGAAACATCATTTTCTCATGATAGTAGCATGGAACTGGCAGATAATTCTAGTGATGATCCATTGCCAGAACTGCACAATCCTACTATGCTCAAAGAAAGAAGTCTTGACTATCCAGGAACCGAGACAGTCAAGAATATGTCTGCATTTGAAGCTACTGATTTAGCTGGCAGTTATGACAATGGCGAGAAGATATCAAGTGACAATGATAATATTTATCTTGGAGAGATCGAAGACACCACATCAAATTCCTTGAATGAGCCAGTTGAAATTAGAAGCAGTCATGAGGAGGCTCCAACCAATGAAATAGTCAATGATGTTGCAGAAGATTTTCTATCCAGTGTGAATACAGAAAATCCAGATTTCAAATCTGAGTTGCGTGGAAGAGATGTTGAAACCAAGAATCTGAATGGTGATGATGGGGAACAAGTTTCCATGACCAAAAGTTTAGTCCTTGAAGGTCTAGTTAGATCACTCAGATCTAATTTGATTGGTTCAGGAGCACCAGCAAATGAACCAACTGCTGAAAGAAAAGAAGGAATTGAAAATGTTAAGCTGGAAACTGAGACTCTTGAAGAGTTCCCAACAAAGGAAGAATCTGAAGCTCCTATGAGTGCTGTTGTAGAACCTGAGACCTCTGTACAGAAACAGAACAACACAGGATTGTGGTACTTGGTGTATAACCACATGGTATCAAATGTGGCTGAAAGTGAAAACAATTCCAAGTCACTAACTGATGGGGAAGATGAGAAAGAGCCAGGGATTGATGGCGGCAGCAGAACAAGAGGAAGTTCCATCGCGTATGAAAGTACACCGGTGACTGATCAAGAGATGCAATTCAAGGACCGCGTTGTAGCTGATCCAGAAGTTGCACGCCAACAGATAGAAGCCATCAAGATGGTAGAAGATGCAATTGATTCAATTCTTCCAGATGAACAGGATGACTTGGCAGGCAAGGAATCACTCACTGACAACGCCATTTCAGAAAACTCCAAACAATCTTACAGAACTGAAAGAGTGAATGGTGAAGGCCTGAATCAAAAAGTAGAAAACATGGAAGCTGGAAATGGAATAATCCAAGAACAAGAAGAATCAGCACCAAAGGAGGGAAACAAAACAAACCAGAAATTGTCTAGAAACTGGAGCAATCTTAAAAAAGTGATCCTGCTTAGGAGATTCATCAAGTCATTGGAAAAAGTAAGGAAATTCAACCCAAGAGGGCCTAGATATTTACCTCTAGTGCCTGATTCAGAAGCTGAAAAGGTTGACTTAAGGCATCAAGACATGGAAGAAAGAAAAGGTACTGAAGAATGGATGCTTGATTATGCACTTCGACAGGTTGTTTCCAAATTAACCCCGGCAAGGAAAAGAAAAGTGGAGCTGCTAGTGGAAGCTTTTGAAACAGTCATTCCAACCATAAAAAAATGA 3294 0.4056 MKVEVEGNHSDYDDSQTVSGTDESVSSQSEKRGRLESKKKLKKVRSIRLVRFPSKRSSTRENLEPLYMAEASPNYMKATTSSHAKDSFQKTQRLFTKKTLTRMSTSLKLKRSLTRKLSGRTEPKRKLKPSRSIKFATFKGQKSIRNFSESSYGSDAANKPLRVMTRRLSFKPVRILAKMATFKSSDTSLHRATCSSAIKDSHFPDHIDLPQEVCSYSYCSLHGHRHHANLPPLKRFVSLRRRALKSQKPTKTDRQPVSRPKKIGNAKRVTQKTQTFHSEDGKSHFENKKKPARGLWIKPHGTPTSTDEVEFSATDTEILEGEVTNTGNTSKNMEPDYEVQKESKHASSIDLASAMQERDKKYVKMWKLMYKHAVLSNTVENKQHFDGKDKEGREQDSLATNEVNNNSSCRDDCDTDQDMDDDENKNNAIELVQKAFDEILLPEPEDLFSDEQFKSEGIDSDEVELEKSDADRERNISSSSESPIAQRMGIKPDQRAPKSWSNLKKLILLKRFVKALEKVRNINPQRPRRFSSDANLEMEKVFLKHQTAEDKKNAEEWMLDYALQKVVSKLAPAQRQKVTLLVKAFETILPFQDAENSPWFSATMEPQANPVQPLDDSSNHSEEETSFSHDSSMELADNSSDDPLPELHNPTMLKERSLDYPGTETVKNMSAFEATDLAGSYDNGEKISSDNDNIYLGEIEDTTSNSLNEPVEIRSSHEEAPTNEIVNDVAEDFLSSVNTENPDFKSELRGRDVETKNLNGDDGEQVSMTKSLVLEGLVRSLRSNLIGSGAPANEPTAERKEGIENVKLETETLEEFPTKEESEAPMSAVVEPETSVQKQNNTGLWYLVYNHMVSNVAESENNSKSLTDGEDEKEPGIDGGSRTRGSSIAYESTPVTDQEMQFKDRVVADPEVARQQIEAIKMVEDAIDSILPDEQDDLAGKESLTDNAISENSKQSYRTERVNGEGLNQKVENMEAGNGIIQEQEESAPKEGNKTNQKLSRNWSNLKKVILLRRFIKSLEKVRKFNPRGPRYLPLVPDSEAEKVDLRHQDMEERKGTEEWMLDYALRQVVSKLTPARKRKVELLVEAFETVIPTIKK 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0495 1097 MobiDBLite consensus disorder prediction 450 476 - -
Aed4g0495 1097 MobiDBLite consensus disorder prediction 885 899 - -
Aed4g0495 1097 MobiDBLite consensus disorder prediction 815 835 - -
Aed4g0495 1097 MobiDBLite consensus disorder prediction 1 42 - -
Aed4g0495 1097 MobiDBLite consensus disorder prediction 246 260 - -
Aed4g0495 1097 SMART CaM_binding_2 476 590 IPR012417 GO:0005516
Aed4g0495 1097 SMART CaM_binding_2 982 1093 IPR012417 GO:0005516
Aed4g0495 1097 MobiDBLite consensus disorder prediction 244 288 - -
Aed4g0495 1097 MobiDBLite consensus disorder prediction 12 26 - -
Aed4g0495 1097 Pfam Plant calmodulin-binding domain 990 1093 IPR012417 GO:0005516
Aed4g0495 1097 Pfam Plant calmodulin-binding domain 491 590 IPR012417 GO:0005516
Aed4g0495 1097 MobiDBLite consensus disorder prediction 945 960 - -
Aed4g0495 1097 MobiDBLite consensus disorder prediction 939 960 - -
Aed4g0495 1097 MobiDBLite consensus disorder prediction 450 497 - -
Aed4g0495 1097 MobiDBLite consensus disorder prediction 273 288 - -
Aed4g0495 1097 MobiDBLite consensus disorder prediction 603 647 - -
Aed4g0495 1097 MobiDBLite consensus disorder prediction 864 879 - -
Aed4g0495 1097 PANTHER CALMODULIN BINDING PROTEIN PICBP 16 1095 - -
Aed4g0495 1097 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 16 1095 IPR044681 GO:0005516
Aed4g0495 1097 MobiDBLite consensus disorder prediction 384 423 - -
Aed4g0495 1097 MobiDBLite consensus disorder prediction 859 901 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0495 Aed-Chr4 3781522 3786771 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0495 498 593 Calmodulin-binding Proteins AT5G04020 48.980 1.31e-21 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0495 - - gmx:100820346 1659.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0495 4 3781522 3786771 Aed4g0495 4 3781522 3786771 ECH