Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0484 ATGTCCTTGCAATTTGACCAAATTCTCGGCGCGCACAGTAACTGCGAGATTACGGTCGAGGCCAACAGCTTTACCTGCAACTCCGATTCAAACGGCGTCGTAATCTCTCTTCCCCGAAGCGGGAAGATCAAAGTGTCAGCAGTGGCTGCAAACCGTGGAAGCGCTTCTGAGGATTTTAGGTCCGGTGATAAAGAACACGAGTTCGTGCTTGTTAATCCTAAAGATGCTGACGCTATTAGCAAATCCTACCTTCAGGCTTTGTCTTGCAGGAAATATCGTACACTACTTATCAAAGCCACTTCTGTTGGAATTTCAGGAAAGGTTATAGCTGCAATTACATACCAAATCATCCCTGCAGATACAGAATATGCAGAGATCCCACTTGCATCTGTCAATGCAATCTATCAACGGAAGGGTTTTGGTCATCTATTGTTTCTAGAGCTAAGAAAGAGACTTCAAAGTGTTGGTGTTCGTTCTATTTTATGCTGGGGGGACAAAGAATCAGAAGGATTTTGGCTTAAACAGGGTTTTGTAGAAATAGCACAGGTGGGGACCAAAGGAAGGGCCCGCAGGTTACCCGTAAAAGCTGATATTCAAAAATCATTATGCTTTCTTGGTGGTTCAATTCTCATGGTTTGCCACCTAGGGAAAGAATTCTTAGCTGATGATGCTAACACTGTGAAGTATCTCCCCTCACAGTTTCAACAGAATTCCCTTACATCTGCCATTGCTGAAAATGAGCAGCTTGAATTCTCGGGAAAGTTACATGTAGATTTGAAATTTCCAGATAAATCTTCCCATAGAACAGAAGCAGTTAAAAATCAACATGAAGCTTTGGATTTGACAGTCACATTGCCAAGGAATGCTGCAGTGGCCAGTGCAGAAAGTTCACAGGGGGGAATTGATGCTAATGTGAAGTATTGTTCTCAATCTACAAAAGGTGCAAAGAGGGCCTGGGAATCCTCTTCATCCTCATTAAAGTCGAAAAGGGTGAAGGGGAGCCAGATGGTTGACTATCAACCAGATTCTAGCTGCGGTTTTTTCTTAGAGACTGATGAGGCCAATCCTTGTTTTGAAGAAGTCCCTCATGATCCCTCAATTACAAAAAGTTCTGAAAAATGCACTGGGGATTATTTGCATTTAGAAGCTCCCATCAACATAGACTCGCCATCCACTAAACAAAGCTTTAGAATTATGTTGATGAATATTGCTGATGATGCTAAGATAGCACAGCTTACGAAGACATTTGTTCTATGTAAGGTGATTGAAGACCTTGGTGGAACTGTATCCCATGATGGAAGTATGACCACACACGTTGTCACAGGAAAAGTGAGGAAGACTCTGAATTTCTGTGCCGCCCTCCGTTCTGGGGCAAAAGCGAGCCCTCATGCTTTGTTTAAGGGTTATGATATATGTATTTCAGCTCATGTTCAAACTCCTGCTAAAACATTGTCTGCAATTGTGAGGTCTGCAGGTGGTAATGTTATTAGTGGACTCGAAAAGGTAAACGAAACATCAACAACAATCTTTGTGACATGTGAAGAAGACACAGAAGAAGCAATGATAGCAGCAAAGAAAGGTATATGGACTTTCAGTTGCGAGTGGTTTATGAACTGTGTCATGAGACAAGAGCTTGACTTGGAGGCCTCCCAGTTTGCAGAGTCCTTGTTGTGA 1674 0.4265 MSLQFDQILGAHSNCEITVEANSFTCNSDSNGVVISLPRSGKIKVSAVAANRGSASEDFRSGDKEHEFVLVNPKDADAISKSYLQALSCRKYRTLLIKATSVGISGKVIAAITYQIIPADTEYAEIPLASVNAIYQRKGFGHLLFLELRKRLQSVGVRSILCWGDKESEGFWLKQGFVEIAQVGTKGRARRLPVKADIQKSLCFLGGSILMVCHLGKEFLADDANTVKYLPSQFQQNSLTSAIAENEQLEFSGKLHVDLKFPDKSSHRTEAVKNQHEALDLTVTLPRNAAVASAESSQGGIDANVKYCSQSTKGAKRAWESSSSSLKSKRVKGSQMVDYQPDSSCGFFLETDEANPCFEEVPHDPSITKSSEKCTGDYLHLEAPINIDSPSTKQSFRIMLMNIADDAKIAQLTKTFVLCKVIEDLGGTVSHDGSMTTHVVTGKVRKTLNFCAALRSGAKASPHALFKGYDICISAHVQTPAKTLSAIVRSAGGNVISGLEKVNETSTTIFVTCEEDTEEAMIAAKKGIWTFSCEWFMNCVMRQELDLEASQFAESLL 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0484 557 Pfam BRCA1 C Terminus (BRCT) domain 464 540 IPR001357 -
Aed4g0484 557 PANTHER N-ACETYLTRANSFERASE 458 556 - -
Aed4g0484 557 PANTHER N-ACETYLTRANSFERASE 13 86 - -
Aed4g0484 557 PANTHER N-ACETYLTRANSFERASE 91 458 - -
Aed4g0484 557 CDD NAT_SF 106 163 - -
Aed4g0484 557 CDD BRCT_PAXIP1_rpt6_like 465 546 - -
Aed4g0484 557 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 71 182 IPR016181 -
Aed4g0484 557 Gene3D - 41 189 - -
Aed4g0484 557 Gene3D BRCT domain 463 555 IPR036420 -
Aed4g0484 557 SUPERFAMILY BRCT domain 450 545 IPR036420 -
Aed4g0484 557 ProSiteProfiles BRCT domain profile. 461 545 IPR001357 -
Aed4g0484 557 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 13 86 - -
Aed4g0484 557 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 458 556 - -
Aed4g0484 557 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 91 458 - -
Aed4g0484 557 Gene3D BRCT domain 387 460 IPR036420 -
Aed4g0484 557 SUPERFAMILY BRCT domain 416 458 IPR036420 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Aed4g0484 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0484 - - gmx:100806087 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0484 4 3723551 3729072 Aed4g0484 4 3723551 3729072 ECH