Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0462 ATGGAGGATGGTTCAAGAAATAGGACTCATTCCAACATGGCTTCAAGAAAAGCTGAAGAAGCGGCTTGGAGACGCTATGAGGCTACTAAGTGGCTAGAAAGCCAAGTGGGTTCTCTTGGTATATCAAAGCGGCCTACAGAGACAGAACTTATTTCTTGCCTGAGAAATGGTCTGATTCTTTGCAATGCCATTAACAAGATTCATCCAGGAGCAGTGCCTAAGGTTGTGGTTGTGGATAATCAAGTCCCTTCAGAATCACTTACATGGGATTCACAGCCTTTGCCAGCCTATCAATATTTTGAAAATGTACGTAACTTTCTGGTTGCCATGGAAGAGTTGAAGCTTCCGGCTTTTGAAGCATCTGATCTTGAAAAGGATACACTAGAGATGGGATCGGCAGCAAAACTTGTTGACTGTATTTTGGCACTTAAATCGTTTCAAGAGATGAAGCAGATGAACAATCAGAATGGATACAACAAACACACAAAATCTCCTTTGTCTTTGAGAATGCATTCAAGAGCAGCTCCATTCTCCTCTGATGCTTGCAGGCACTTGGATTTGTCTGCCTCATTGGAAAAAACGCCTCCTGTTGAGAATGATTTTCTGAAAAGAGAAGCAGAAATTGTGGAGTTACTTGCCAAGCAACTGGTTGACCGTATGGTTGATGCCAAAGAAAATATCGATGGAAACATCATTGCTTCTCTCCGTAAAGAACACCTGGTAGCAGATCCAATAAAGGTATTTAATCAGATAATGGCATGTTGTAATGGGGAACAGCCACCTACAAGGTTCCATGAGGATTCTGTAAAAGAAAATGGTAGCTTACCACCACCTCATTCCACTTCAAAACCTACGCAATCAGATGCTTTATCCGCTCCAGACAGTTCTAAGCATTGCCAAGCTTGCCCCGGAAAGTGCAAGTGCATTCAGTTACATCTTTTAGACATGCAGGAAAAAGAACTTCTGGATCTCAAGGCTTTGAAGTTGAAAATTAAGAAAGATGTTGAAGAGATGCAGTCACAGATGAATGTCTTTTGTATACCTGTTTCAATAAAAACAACATTTGCCCCAGAAAAGGCTGTTGATATTGATAGTCTGGAGTTATCTTGCTTCATGAATTCAGGGAGTCAAATACAGGAGATGTCAACTAAAGCTCTTGGATATCACAAAGTAGTAGAAGAGAATAGGAAACTATACAACATGGTCCAAGATTTGAAGGGTAATATCCGAGTTTACTGCAGAATCAGGCCCTCATTCCAGGCTGAATCCAAGAATGTTGTTGATTTCATTGGGGAAGATGGTTCTCTATTCATTTTAGATCCAACAAAAACACTAAAAGATGGAAGGAAACTTTTTCAGTTTAATCAGGTTTTTGGTCCAACAACTGGCCAAGGCGAGGTTTATAAGGATACTCAACCATTAATTAGATCTGTGATGGATGGGTACAATGTTTGTATTTTTGCGTATGGTCAAACTGGATCAGGGAAGACTTACACCATGAGTGGTCCTTCAGGTGGAGGGTCAAAGGATATGGGAATCAATTATCTGGCACTTAATGATCTGTTTCAAATGTCTAATGAAAGGAAGGACATTGTAAGCTATGACATTTATGTTCAAATGGTGGAGATTTACAATGAACAAGGTCAAACATTTTCACGCTGCTCTGAAGAGATGAAGAAGAGAAAGCTTTATTTTTCTAAAATCCGGAGCTGCAATGATGATGGGTTGAGCCTTCCTGATGCCAGATTGCGTTCAGTGAAGTCTCCAACTGATGTTATGACCCTCATGAAACTTGGTGAGGTTAATCGTGCCGTCAGTTCGACTGCAATGAACAATAGGAGTAGTCGTTCCCACAGTGTACTTACTGTGCATGTTCATGGCAAAGATACATCTGGGAGCTACATTCGTAGTTGTCTGCACTTGGTAGACCTTGCTGGAAGTGAACGAGTAGACAAGTCTGAAGTTACAGGGGAAAGACTAAAGGAAGCACAATTTATTAACAAGTCTCTTTCCTGTCTTGGAGATGTGATCACAGCCCTGGCTCAAAAGAATTCCCACATCCCATATAGGAACAGCAAACTCACACTTCTTTTGCAGGACTCCTTAGGTGGACATGCTAAAACATTGATGTTTGCTCATGTGAGTCCGGAAGCAGATTCATTTGGTGAAACAGTGAGTACTCTAAAGTTTGCTCAGCGGGTTTCCACAGTGGAACTGGGGGCAGCCCGTATGAACAAAGAAACCAACAAGGTTATGCAACTTAAAGAACAGGTTGAGAACCTCAAGATTGCATTGGCAACCAAGGAAACTCAGAGAGTAATGTTCCAAAGAATTAAAGAACCACACACTCCATTAGAGAAGCCAACACTGGTGTCTGAGAAAACTCCAATGCGCCCTCGAAGACTTAGCATTGAGAACTGCAGTACAGTAAAGACTGACAAATCTGTGTATTGTGGGGATAGAAGTAGAAGCAAAACACCACCGTTGTTTCCTCGTTCGAGAAGATTAAGTTTGGAAGGTTCAAAAACTATCAAGAAGGATAGTCTACAACCAAAATTATTAGATGAGGCAATAACCAAAGCTTTACAGTATGAGCCAGTGTCTCGGCAGAAATATCCCCCAATGCAACAAGATCCAGAATCAGTGTCAAAACTAAACAGCCATTTCAGCAGTGGCAATTCCAAGTCAGAGTTTCACACCAAAACTCCTCGAAGTCCTACTAGCATTTCCTATCAAAACAGATTGGTAAAAGTAAATGGTGGGATGCAAGTTCATCCTCTTAAACTGCCTCAAACACCTGAACCACCAGTGCTGGATGGAAATGATGCACATGGCACTAAGGCGGTTGAGAAGACTAAAAGGAGGGAATCTCTAACAGGGATTCAACCACCGCTGCCCCGTAGGTCTTCACTCGGAGGGAAGCCGCCGTTTTGTGTCATATCTGAAGATGACAAGGAAACAAATGCTAGAAGTAGAACTCCTCCTCCTTCCCAATCAGACACCAAGACTGTGAAGCGGTGGCTATAG 3027 0.4192 MEDGSRNRTHSNMASRKAEEAAWRRYEATKWLESQVGSLGISKRPTETELISCLRNGLILCNAINKIHPGAVPKVVVVDNQVPSESLTWDSQPLPAYQYFENVRNFLVAMEELKLPAFEASDLEKDTLEMGSAAKLVDCILALKSFQEMKQMNNQNGYNKHTKSPLSLRMHSRAAPFSSDACRHLDLSASLEKTPPVENDFLKREAEIVELLAKQLVDRMVDAKENIDGNIIASLRKEHLVADPIKVFNQIMACCNGEQPPTRFHEDSVKENGSLPPPHSTSKPTQSDALSAPDSSKHCQACPGKCKCIQLHLLDMQEKELLDLKALKLKIKKDVEEMQSQMNVFCIPVSIKTTFAPEKAVDIDSLELSCFMNSGSQIQEMSTKALGYHKVVEENRKLYNMVQDLKGNIRVYCRIRPSFQAESKNVVDFIGEDGSLFILDPTKTLKDGRKLFQFNQVFGPTTGQGEVYKDTQPLIRSVMDGYNVCIFAYGQTGSGKTYTMSGPSGGGSKDMGINYLALNDLFQMSNERKDIVSYDIYVQMVEIYNEQGQTFSRCSEEMKKRKLYFSKIRSCNDDGLSLPDARLRSVKSPTDVMTLMKLGEVNRAVSSTAMNNRSSRSHSVLTVHVHGKDTSGSYIRSCLHLVDLAGSERVDKSEVTGERLKEAQFINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFGETVSTLKFAQRVSTVELGAARMNKETNKVMQLKEQVENLKIALATKETQRVMFQRIKEPHTPLEKPTLVSEKTPMRPRRLSIENCSTVKTDKSVYCGDRSRSKTPPLFPRSRRLSLEGSKTIKKDSLQPKLLDEAITKALQYEPVSRQKYPPMQQDPESVSKLNSHFSSGNSKSEFHTKTPRSPTSISYQNRLVKVNGGMQVHPLKLPQTPEPPVLDGNDAHGTKAVEKTKRRESLTGIQPPLPRRSSLGGKPPFCVISEDDKETNARSRTPPPSQSDTKTVKRWL 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0462 1008 ProSiteProfiles Calponin homology (CH) domain profile. 22 148 IPR001715 GO:0005515
Aed4g0462 1008 PRINTS Kinesin heavy chain signature 687 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g0462 1008 PRINTS Kinesin heavy chain signature 481 502 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g0462 1008 PRINTS Kinesin heavy chain signature 608 625 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g0462 1008 PRINTS Kinesin heavy chain signature 638 656 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g0462 1008 ProSiteProfiles Kinesin motor domain profile. 408 737 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g0462 1008 MobiDBLite consensus disorder prediction 991 1008 - -
Aed4g0462 1008 Coils Coil 744 771 - -
Aed4g0462 1008 Gene3D Kinesin motor domain 403 778 IPR036961 -
Aed4g0462 1008 Gene3D - 8 170 IPR036872 -
Aed4g0462 1008 PANTHER KINESIN-LIKE PROTEIN KIN-14L 7 994 - -
Aed4g0462 1008 Pfam Kinesin motor domain 414 736 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g0462 1008 MobiDBLite consensus disorder prediction 274 294 - -
Aed4g0462 1008 MobiDBLite consensus disorder prediction 865 910 - -
Aed4g0462 1008 SMART ch_5 24 137 IPR001715 GO:0005515
Aed4g0462 1008 MobiDBLite consensus disorder prediction 262 294 - -
Aed4g0462 1008 MobiDBLite consensus disorder prediction 874 910 - -
Aed4g0462 1008 MobiDBLite consensus disorder prediction 817 843 - -
Aed4g0462 1008 Pfam Calponin homology (CH) domain 24 144 IPR001715 GO:0005515
Aed4g0462 1008 SUPERFAMILY Calponin-homology domain, CH-domain 21 161 IPR036872 -
Aed4g0462 1008 MobiDBLite consensus disorder prediction 928 1008 - -
Aed4g0462 1008 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 408 771 IPR027417 -
Aed4g0462 1008 PANTHER KINESIN-LIKE PROTEIN KLP-3 7 994 - -
Aed4g0462 1008 SMART kinesin_4 406 745 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0462 Aed-Chr4 3481121 3488337 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0462 375 737 Calmodulin-binding Proteins AT5G65930 40.374 7.33e-65 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0462 K10406 - gmx:100786642 1538.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0462 4 3481121 3488337 Aed4g0462 4 3481121 3488337 ECH