Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0460 ATGGTGATGGTATGGGAAGATGTAACAGTTGAGATGCGTGATAGTTATGGAGCACACAATAACAAGAAGTTGCTTAATGGAGTTACTGGTTTTGCTGAACCTGCTAGGATTATGGCTGTCATGGGAAAACTTGATGCAAATGTTGTAGTAACCGGCAACATTCTAATCAATGGGAAGAAGAAAAGCTTGTATTCCAAAGAAGTGTCCTACGTGGCAGAAGAGGAGCTTTTCTTGGGAACTTTGACAGTAAAAGAGACCCTCACATTCTCTGCAAACATGAGGCTTCCTTCTAAAATGAGTAAAGAAGAGATAAACAAAGTGGTGGAAGAAACCATAATGGAAATGGGTCTGGAAGATTGTGCAGATACTAGAATTGGAAATTGGCATTGTAGAGGTATTAGTAGTGGTGAAAAGAAGAGACTCAGTATTGGCCTTGAGATTCTGACACAACCATATGTCTTACTTCTTGATGAACCTACAACTGGACTTGACAGTGCCTCAGCTTTCTATGTCATTCAATCTCTATGCCAAATTGCTCTCAATGGAAAGATAGTTATCTGTTCCATTCACCAGCCCAGTAGTGAGATTTTTAGTCTTTTTGATGATTTGCTTTTGCTCTCAAGTGGGGAAACTGTTTATTTTGGAGAAGCCAAGATGGCTCTAAAGGTATATTTTTTTACTTGGACTATACTGACAAAGTTGGATTCCAATATAATTTTGAGTTTAATGGTGACGCAGTATAAAATAGTTGTTCAATTACACTTTACTATTTGTATGACTTTTAAAATAATTTTATAA 798 0.3709 MVMVWEDVTVEMRDSYGAHNNKKLLNGVTGFAEPARIMAVMGKLDANVVVTGNILINGKKKSLYSKEVSYVAEEELFLGTLTVKETLTFSANMRLPSKMSKEEINKVVEETIMEMGLEDCADTRIGNWHCRGISSGEKKRLSIGLEILTQPYVLLLDEPTTGLDSASAFYVIQSLCQIALNGKIVICSIHQPSSEIFSLFDDLLLLSSGETVYFGEAKMALKVYFFTWTILTKLDSNIILSLMVTQYKIVVQLHFTICMTFKIIL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0460 265 ProSitePatterns ABC transporters family signature. 133 147 IPR017871 GO:0005524
Aed4g0460 265 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 1 224 - -
Aed4g0460 265 Pfam ABC transporter 52 160 IPR003439 GO:0005524
Aed4g0460 265 Gene3D - 4 227 IPR027417 -
Aed4g0460 265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 218 IPR027417 -
Aed4g0460 265 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 10 233 IPR003439 GO:0005524
Aed4g0460 265 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0460 Aed-Chr4 3467197 3471618 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0460 51 202 Calmodulin-binding Proteins AT2G36910 25.153 4.94e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0460 - K05681 gmx:100802207 377.096