Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0459 ATGTCTATGGAGATGGTGATGTTATGGGAAGATATAACGGTTCAGCAGCACCGTGTTTTTGGAGCAGAGAAGAAGAAGTTGCTGAGCGGAATCACTGGTTTTGCTGAAGCTGGAAGGATCATGGCTGTTATGGGTCCTTCTGGCTGTGGCAAAACCACAATGCTTCACTCTTTGGCTGGAAAACTAGCTGCAAATGTTGTAGTAACCGGGAACATTCTAATCAATGGGAAGAAGAGAAATTTGTACTCCAGAGAAGTGTCCTACGTGGCACAAGAGGAACTTTTCTTGGGAACTTTGACTGTAAAAGAGACCCTCACATACTCAGCAAACATGAGGCTTCCTTCTAAAATGAGCAAAGAAGAGATAAACAAAGTGGTGGAAGAAACAATAATAGAAATGGGTCTAGAAGATTGTGCAGATAATAGAATTGGAAATTGGCATGGTAGGGGTATTAGTAATGGTGAAAAGAAGAGACTTAGCATTGGACTTGAGATTTTAACACAACCCCATGTCTTACTTCTTGATGAACCTACTACTGGACTTGATAGTGCCTCAGCTTTCTATGTCATTCAATCTCTATGTCACATTGCTCTCAATGGAAAGATTGTTATCTGTTCCATTCACCAGCCTAGTAGTGAAACTTTTGATCTATTTGATGATTTGCTCTTGCTCTCAAATGGTGAAACTGTTTATTTTGGAGAAGCCAATATGGCTCTAAAGTCACTAAATGAAGTTTGGGAAAAGTTTTTTGCTGGTGCAGGGTTACCATGTCCCTCTAGAAGAAATCCTTCGGATCATTTCCTTCTTTGTATCAATTTGGACTTTGACTTGCTTACTTCAGCTCTAGCAAGAGCACAATTAGATTTGCCATCTTCATCAAATTCAGCACTGGGAACGAAGAAAGCTGAGATTAGAGAGACACTTATTCGAAGTTATAAAAGTTCAGTGCTAATGATCAATACGAGAAGAAGAATTCAACAATTGAAGTCTAATGAAGAGCAAGAAATTAAGCCCAACATAGGTATCAGGACAACATGGTGGAGGCAGTTGTGTACATTAACTGAACGATCTTTATTAAACATGACTAGGGACATTGGTTACTACTGGCTGAGGATAGTATTCTTTATACTAGTAGGAATCACTCTTGGCACCCTCTATTTTCATGTTGGCACAGGCAACAACTCAATTTTGGCTAGAGGAAAGTGCGTATCATTCATCTTTGGCTTCTATATTTGTTTGTCATGTGGAGGATTACCATTTTTCATTGAAGAATTGAAGTGCTGCATGATGGTTGTAGCCTCAGTGGTCCCCAATGTGCTCATGGGCTTAGGAACAGGAACTGGTGTTTTCATGATGATGTCCTCCCAATTATTCCGACCAATAAATGACATTCCAAAGTTCTTTTGGCGCTACCCCATGTCATACCTCAGTTTTGCTACATGGGCAGTGCAGGGACAGTTCAAGAACGACATGCTGGGGCTTGAATTTGACCCTCTTCTACCGGGGGACCCTAAAGTTACTGGAGAGCATGTCCTAACGTTGGTATATGGTGTCCCACTGAATCATGACAAATGGTGGGACTTAGCAGCATTGCTTATTTTGTTATTGCTTCACAGATTGCTTCTTTTCTTCGTGCTTTGCTACAACAAAAGATCACCCAGTGTCGTGGTTTGCAGAAAGATGTCTGTTATTTAG 1695 0.4077 MSMEMVMLWEDITVQQHRVFGAEKKKLLSGITGFAEAGRIMAVMGPSGCGKTTMLHSLAGKLAANVVVTGNILINGKKRNLYSREVSYVAQEELFLGTLTVKETLTYSANMRLPSKMSKEEINKVVEETIIEMGLEDCADNRIGNWHGRGISNGEKKRLSIGLEILTQPHVLLLDEPTTGLDSASAFYVIQSLCHIALNGKIVICSIHQPSSETFDLFDDLLLLSNGETVYFGEANMALKSLNEVWEKFFAGAGLPCPSRRNPSDHFLLCINLDFDLLTSALARAQLDLPSSSNSALGTKKAEIRETLIRSYKSSVLMINTRRRIQQLKSNEEQEIKPNIGIRTTWWRQLCTLTERSLLNMTRDIGYYWLRIVFFILVGITLGTLYFHVGTGNNSILARGKCVSFIFGFYICLSCGGLPFFIEELKCCMMVVASVVPNVLMGLGTGTGVFMMMSSQLFRPINDIPKFFWRYPMSYLSFATWAVQGQFKNDMLGLEFDPLLPGDPKVTGEHVLTLVYGVPLNHDKWWDLAALLILLLLHRLLLFFVLCYNKRSPSVVVCRKMSVI 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0459 564 Pfam ABC transporter 35 178 IPR003439 GO:0005524
Aed4g0459 564 Pfam ABC-2 type transporter 348 424 IPR013525 GO:0016020|GO:0140359
Aed4g0459 564 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 7 251 IPR003439 GO:0005524
Aed4g0459 564 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 5 426 - -
Aed4g0459 564 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 426 555 - -
Aed4g0459 564 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 426 555 - -
Aed4g0459 564 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 5 426 - -
Aed4g0459 564 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 240 IPR027417 -
Aed4g0459 564 Pfam ABC-2 type transporter 208 269 IPR043926 GO:0140359
Aed4g0459 564 Gene3D - 13 250 IPR027417 -
Aed4g0459 564 SMART AAA_5 37 228 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0459 Aed-Chr4 3454899 3458691 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0459 35 212 Calmodulin-binding Proteins AT2G36910 28.415 3.15e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0459 - K05681 gmx:100787198 839.336