Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0458 ATGGAGGCAGAGAATGTGTTTCCTATCAAAATGGAGTTGCAGGATTATGCAGGGCTAGGAGTAGAGAATAAGACGAGAGTGAGTTTAGTTTGGGAAGATTTAACAGTGGTGACATCAAATGTTAGTAGTAGTAGTCCAAAAAGGGAACTGTTAAAAGGGTTAAGTGGTTATGCAGAACCAAACCGGATTATGGCACTCATTGGCCCTTCAGGTTCTGGGAAATCTACTTTACTTGCTGCACTGGCTGGGATACTTCCCACCAATGTTAGCATGACCGGAAATGTACTACTCAACGGTACTACCAGAACTACAGCCTGCAGAGATATTTCTTATGTTACTCAAGAAGATTATTTCTTGGGAACTCTAACAGTGAAGGAAACCCTCACATATTCAGCTCATCTGAGACTTCCTGCTGATATGACTAAAGATGAGATTGAGAAGGTGGTAACCAAGATATTGGCTGAAATGGGTCTGCAAGATAGTGCAGATAGCAGGCTTGGGAATTGGCATTTGAGAGGCATAAGCAGTGGAGAGAAAAGAAGGCTTACCATAGGCATTGAGATGTTAACTCAACCTCATGTGATGTTTCTGGATGAACCAACTAGTGGTTTGGATAGTGCAGCTGCTTTCTATGTGGTTTCTTCTCTGTCAAACATAGCACATGATGGAAGAATAGTTGTGTGCTCCATTCACCAGCCAAGTGGTGAAGTTTTCAACCTTTTTGATGATCTGGTCCTCCTTGCTGGAGGTGAATCTGTGTATTTTGGAGAAGCAACTATGGCTGTAAAGGTAAAGAATGTTCTTTGA 807 0.4213 MEAENVFPIKMELQDYAGLGVENKTRVSLVWEDLTVVTSNVSSSSPKRELLKGLSGYAEPNRIMALIGPSGSGKSTLLAALAGILPTNVSMTGNVLLNGTTRTTACRDISYVTQEDYFLGTLTVKETLTYSAHLRLPADMTKDEIEKVVTKILAEMGLQDSADSRLGNWHLRGISSGEKRRLTIGIEMLTQPHVMFLDEPTSGLDSAAAFYVVSSLSNIAHDGRIVVCSIHQPSGEVFNLFDDLVLLAGGESVYFGEATMAVKVKNVL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0458 268 ProSitePatterns ABC transporters family signature. 174 188 IPR017871 GO:0005524
Aed4g0458 268 SMART AAA_5 60 259 IPR003593 -
Aed4g0458 268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 258 IPR027417 -
Aed4g0458 268 Gene3D - 31 267 IPR027417 -
Aed4g0458 268 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 36 267 IPR003439 GO:0005524
Aed4g0458 268 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 28 264 - -
Aed4g0458 268 Pfam ABC transporter 51 202 IPR003439 GO:0005524
Aed4g0458 268 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 28 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0458 Aed-Chr4 3448215 3453253 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0458 44 243 Calmodulin-binding Proteins AT2G36910 27.014 3.22e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0458 - K05681 gmx:102659519 443.736