Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0456 ATGGGAGCTGCGTCGAGGCAGTTGAAGGTCATGCTCCGCAAGAACTGGCTACTCAAGATTCGTCATCCCTTCATCACTGCCGCCGAGATTTTGCTCCCTACGATTGTGTTGTTGCTGTTAGTAGCTATAAGGACGAAAGTCGATACACAAATTCATTCAGCTCAGCCGCACGTTCAAAAAGATATGTTTGTGGAAGTGGGCAAAGGTATATCCCCCAACTTTCAACAACTTTTGCAATCGTTGTTGAATGGGGGAGAGTATTTAGCTTTTGCGCCTGATACCAATGAGACCAAGCTGTTGATAGACGTAGTATCAATACAATTTCCACTCTTGAAGCTAGTTAGTAGAGTATACAAAGATGAGGTAGAGTTGGAAACCTACATCCGCTCAGATGCTTATGGTACCTGCAATCAAGCAAGGAATTGCTCAAATCCCAAAATTAAAGGAGCTGTTGTGTTTTATGAACAAGGTCCTCAATCATTTGATTATGGCATACGCCTCAATCATACATGGGCTTTCTCAGGTTTTCCAGATGTTACAACAATAATGGATACAAATGGTCCGTTTCTTAATGACTTGGAACTTGGTGTTAGTGCTGTACCAACAATGCAATACAGCTTGAGTGGGTTTTTGACTCTCCAGCAAATGGTTGATTCATTCATAATATTAATAGCGCAGCAGTCTGACTTCAATTTCAATGCTGGAAATCTAGAGCTTCCTCTTCCAGGCTTCTATGACACTAACTTCTCTTTGAAAAATCCATGGACTCAGTTTACCCCTGCTCACATACGAATAGCTCCATTTCCCAATCGAGAGTACACTGATGATCAGTTCCAGTCAATCATAAAGAAAGTCATGGGAATATTGTACTTATTGGGGTTTCTCTTTCCAATTTCTCGCCTAATCAGTTATTCTGAACAGAAGATTAAAGAAGGACTCTATATGATGGGCCTGAAAGATGGTATATTTCATCTTTCTTGGTTTATCACATATGCTTTGCAGTTTGCAATTTCTTCTGGGATCCTTACAGCTTGCACCATGGATAATTTATTCAAGTATAGTGATAAGACACTGGTGTTTGCATACTTTTTTGTTTTTGGGCTTAGTGCAATCATGCTCTCATTCTTTATATCAACATTTTTCAAACGGGCCAAAACAGCTGTAGCTGTTGGAACTTTGTCGTTTCTTGGAGCCTTTTTCCCTTATTACACTGTCAACGACGAGGGAGTTTCAATAATCTTGAAGGTTATTGCTTCTTTACTTTCACCTACGGCCTTTGCTTTGGGTTCAATCAACTTTGCCGATTATGAGCGTGCTCATGTTGGACTTCGTTGGAGCAACATATGGCGGGAATCATCTGGAGTGAACTTTTTGGCATGCCTTCTGATGATGATACTTGATACATTGCTATATTGTGCGATTGGACTTTATTTTGATAAGGTTCTTCCAAGGGAGTATGGACAGAGATACCCATGGAGCTTTATTTTCCAAAAGGACTTCTGGAGGAAGAAAAAAAATGTACAAAATTGTAAGAATTCTGAGTCAGAAGGGAATCTTTCAGCGGAATATACTTCCAAATCTGCCATAGAAGCAATAAGCTTAGACATGAAACAACAGGAGCTTGATGGCAGGTGCATTCAAATCAGGAATTTGCATAAAGTGTATGCTACAAAGAAAGGAGATTGCTGTGCAGACATAATGGAGCTGGGAAAAGCACAACAATCTCAATGCTTGTTGGATGAGATACGAAAGGTTTTGGGTGTTTGCCCACAACATGATATACTCTTTCCTGAATTAACAGTTAGAGAGCATTTAGAACTATTTGCAACATTAAAGGGTGTGGAGGAACATTCATTGGACAATGCTGTTATTAATATGGCTGATGAGGTCGGCCTGGCTGATAAAATCAACAGTATTGTGAGAACTCTTTCTGGTGGCATGAAGAGGAAATTGTCTCTTGGAATTGCATTGATTGGAAACAGTAAGGTTATAGTCCTCGATGAACCTACTAGTGGAATGGATCCATACTCGATGCGCTTGACTTGGCAATTAATAAAAAAAATTAAGAAGGGAAGGATAATTTTGCTAACTACACATTCTATGGATGAAGCAGATGAACTAGGTGACCGCATAGCTATCATGGCCAATGGTTCTCTGAAATGCTGTGGAAGCTCACTTTTCTTGAAGCATCATTATGGAGTTGGCTATACTCTAACTCTTGTGAAGTCAGCTCCTACTGCTTCTATAGCTGGTGATATAGTATACCGTCATGTTCCATCTGCAACATGTGTAAGCGAGGTTGGAACTGAGATTTCTTTCAGGCTTCCAATGGCATCCTCATCAGCCTTTGAGAGGATGTTTAGGGAAATTGAAGGTTGCATGAAAAAACCAATTTCAAATATGGAATTGAGTGGAAATGGTGATAAAGACAGTCTTGGTATTGAAAGCTATGGTATATCTGTAACAACCCTGGAGGAGGTATTTTTGAGAGTTGCAGGATGTGACTATGATGAAGTTGAATGCTTTGAAGAAAATAATCATTCCCATAAATCAGATTCGGTGGCTTCTCTTCCTACTAATGATCATCCTTCAACAAAAATAAGTTGTCTTAAAATTTTTGGAAATTATAAGAAGATTTTTGGTTTCATGTCTACTATGTTGGGAAGAGCCTGCAGCTTAATTTTTGCTACAGTCATTAGTTTTATCAACTTCTTGAGTATGCAGTGCTGTTGCTGTTGTTTCATTACTAGGTCAACATTTTGGCAACATTCTAAAGCCTTATTCATTAAAAAGGCAATATCTGCTCGGAGAGATCACAAAACAATTATTTTCCAGCTAATGATTCCCACTCTCTTCTTGTTTATTGGTCTTCTATTTCTGAAGCTCAAGCCACATCCTGATCAGCAATCACTGACCCTTTCAACTTCTCATTTTAATCCTCTATTGAGTGGTGGGGGTGGAGGAGGTCCAATTCCATTTAATCTATCTTTGCCAATTGCTGAAAAGGTAGCACAAAATGTCATAGGAGGTTGGATTCAGAGGTTCAAGCCAAGCTCGTACAGATTCCCTAATTCAGAAAAAGCATTGGCTGATGCAGTGGAAGCAGCAGGACCAACCTTGGGACCTGCTCTACTTTCAATGAGTGAATATTTGATGTCAAGCTTTAATGAATCCTACGAATCTAGGTATGGGGCAATTGTGATGGATGATCAGAATAATGATGGAAGCTTAGGATACACAGTATTGCACAACTGTTCCTGTCAACATGCTGCTCCTACCTTTATCAATTTGATGAATTCTGCAATTCTCAGGCTTGCAACTCATGACACAAACATGACAATTCAAACACGCAACCACCCTTTACCAACGACACAAAGCCAGCGCTTACAACGTCATGACCTGGATGCTTTCTCTGCTGCAGTTATTATCAATATTGCTTTCTCTTTTATACCTGCCTCATTTGCCGTTTCAATTGTTAAGGAACGTGAAGTGAAAGCTAAGCAGCAACAACTAATCAGCGGGGTTTCTGTTCTGTCATATTGGGCTTCTACATTTATTTGGGATTTTGTGAGCTTCTTGTTTCCGGCCTCTTTTGCCATAGTTCTCTTTTACATCTTTGGTATGGATCAGTTTGTTGGAGGGGTTTCTTTGTTACCAACAATCCTCATGCTTTTGGAATATGGGCTTGCAATTGCATCATCAACTTATTGCCTTACTTTTTTCTTTTTTGACCATACCATGGCTCAGAATGTGGTTCTCCTGATCCACTTTTTCACTGGATTGATACTAATGGTTATCTCATTCATTATGGGACTCATGCCATCAACAATGAGTGCCAATTCTTTTCTTAAGAATTTTTTCAGAATATCTCCTGGATTTTGTTTCGCTGATGGTCTTGCTTCACTAGCTCTTTTGCGGCAAGGAATGAAAGATAAAACAAGTGATGGAGTGTTTGATTGGAATGTCACCGGGGCTTCCATCTGTTATCTTGCGGTTGAGAGCTTTTGTTACTTTCTGTTGACACTTGCACTTGAAATGTTTCCTTCTCTCAAATTGACTTCATTTATGATCAAGAAGTGGTGGGGAAAAACTAATATCTTCCAGCATCATACTCCATATTTGGAACCTCTGTTAGAATCATCCTCCGAAACTATTGCTATGGACTTTGACGAAGATGTAGATGTGAAAACAGAAAGAAATAGAGTACTTTCAGGTTCCCTTGACAATTCCATTATCTACCTTCGTAATCTTTGTAAGGTATATTTTGAGGAGAAGCATCATGGGAGAAAGGTTGCAGTAGATTCATTAACTTTCTCAGTTCAGGAAGGAGAATGTTTCGGCTTTTTAGGAACGAATGGAGCTGGAAAGACCACAACTCTTTCTATGCTATGTGGGGAAGAATCTCCTTCTGATGGGACTGCTTTTATTTTTGGCAAAGATATATGTTCCCATCCGAAGGCTGCTCGTCGATATATTGGATATTGTCCACAATTTGATGCGCTTTTGGAATTCTTAACTGTCCGAGAACATCTTGAGCTTTATGCTAGAATAAAAGGTGTTCCAGATTTTGCAATAGAAAATGTTGTTATGGAAAAGTTGGCAGAGTTTGACTTATTGAAGCATGCTAATAAGCCATCATTTTCACTTAGTGGAGGGAATAAAAGAAAACTGTCTGTTGCAATTGCAATGATTGGAGATCCTCCTATTGTCATTCTTGATGAGCCATCAACAGGTATGGATCCCATTGCCAAAAGGTTCATGTGGGATGTAATATCTAGGATCTCAACAAGACGAGGAAAGACTGCAGTAATTCTTACTACTCACAGCATGAATGAAGCTCAAGCCTTATGTACCAGAATAGGGATAATGGTTGGTGGACGATTACGATGCATTGGAAGTCCACAGCATCTAAAAACAAGATTTGGGAATCATCTGGAACTAGAGGTCAAGCCTACTGAAGTGTGTTCTGTGGACTTGCAAACGCTCTGCCAAGCTATTCAAGAAAGACTTCTTGATGTCCCTTCTCATCCTAGAAGCTTACTTAATGACCTTGAAATTTGCATTGGGGGCACTGACTCTGTCACATCAGGAAACACCTCCATTGCAGAGATTAGCTTGACACGAGAAATGATAGGCTCAATTGGGCGCTGGCTTGGCAATGAAGAAAGAGTAAAGACACTAATCTCTGGTACACCTGTCTGTGATGGAGCCTCTCAAGAACAGTTATCAGAACAACTGTTTCGAGATGGTGGCATTCCATTGCCAGTATTTTCTGAGTGGTGGCTGTCTAAACAAAAATTCTCAGAAATTGATTCATTTATTCTCTCTTCATTTCGTGGAGCAAGATGCCAAGGGTGCAATGGTTTGAGCATCAGATATCAGTTACCTTACAATGAAGATTTTTCACTAGCAGATGTTTTTGGACTTCTTGAAAGAAATAGAAATAGATTAGGTATTGCAGAGTACAGCATCAGCCAATCAACTCTGGAGACAATATTTAATCATTTTGCAGCTAATCCATGA 5523 0.3965 MGAASRQLKVMLRKNWLLKIRHPFITAAEILLPTIVLLLLVAIRTKVDTQIHSAQPHVQKDMFVEVGKGISPNFQQLLQSLLNGGEYLAFAPDTNETKLLIDVVSIQFPLLKLVSRVYKDEVELETYIRSDAYGTCNQARNCSNPKIKGAVVFYEQGPQSFDYGIRLNHTWAFSGFPDVTTIMDTNGPFLNDLELGVSAVPTMQYSLSGFLTLQQMVDSFIILIAQQSDFNFNAGNLELPLPGFYDTNFSLKNPWTQFTPAHIRIAPFPNREYTDDQFQSIIKKVMGILYLLGFLFPISRLISYSEQKIKEGLYMMGLKDGIFHLSWFITYALQFAISSGILTACTMDNLFKYSDKTLVFAYFFVFGLSAIMLSFFISTFFKRAKTAVAVGTLSFLGAFFPYYTVNDEGVSIILKVIASLLSPTAFALGSINFADYERAHVGLRWSNIWRESSGVNFLACLLMMILDTLLYCAIGLYFDKVLPREYGQRYPWSFIFQKDFWRKKKNVQNCKNSESEGNLSAEYTSKSAIEAISLDMKQQELDGRCIQIRNLHKVYATKKGDCCADIMELGKAQQSQCLLDEIRKVLGVCPQHDILFPELTVREHLELFATLKGVEEHSLDNAVINMADEVGLADKINSIVRTLSGGMKRKLSLGIALIGNSKVIVLDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLVKSAPTASIAGDIVYRHVPSATCVSEVGTEISFRLPMASSSAFERMFREIEGCMKKPISNMELSGNGDKDSLGIESYGISVTTLEEVFLRVAGCDYDEVECFEENNHSHKSDSVASLPTNDHPSTKISCLKIFGNYKKIFGFMSTMLGRACSLIFATVISFINFLSMQCCCCCFITRSTFWQHSKALFIKKAISARRDHKTIIFQLMIPTLFLFIGLLFLKLKPHPDQQSLTLSTSHFNPLLSGGGGGGPIPFNLSLPIAEKVAQNVIGGWIQRFKPSSYRFPNSEKALADAVEAAGPTLGPALLSMSEYLMSSFNESYESRYGAIVMDDQNNDGSLGYTVLHNCSCQHAAPTFINLMNSAILRLATHDTNMTIQTRNHPLPTTQSQRLQRHDLDAFSAAVIINIAFSFIPASFAVSIVKEREVKAKQQQLISGVSVLSYWASTFIWDFVSFLFPASFAIVLFYIFGMDQFVGGVSLLPTILMLLEYGLAIASSTYCLTFFFFDHTMAQNVVLLIHFFTGLILMVISFIMGLMPSTMSANSFLKNFFRISPGFCFADGLASLALLRQGMKDKTSDGVFDWNVTGASICYLAVESFCYFLLTLALEMFPSLKLTSFMIKKWWGKTNIFQHHTPYLEPLLESSSETIAMDFDEDVDVKTERNRVLSGSLDNSIIYLRNLCKVYFEEKHHGRKVAVDSLTFSVQEGECFGFLGTNGAGKTTTLSMLCGEESPSDGTAFIFGKDICSHPKAARRYIGYCPQFDALLEFLTVREHLELYARIKGVPDFAIENVVMEKLAEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRFGNHLELEVKPTEVCSVDLQTLCQAIQERLLDVPSHPRSLLNDLEICIGGTDSVTSGNTSIAEISLTREMIGSIGRWLGNEERVKTLISGTPVCDGASQEQLSEQLFRDGGIPLPVFSEWWLSKQKFSEIDSFILSSFRGARCQGCNGLSIRYQLPYNEDFSLADVFGLLERNRNRLGIAEYSISQSTLETIFNHFAANP 1840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0456 1840 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1412 1650 IPR003439 GO:0005524
Aed4g0456 1840 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1602 1837 IPR026082 GO:0016021|GO:0055085|GO:0140359
Aed4g0456 1840 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 6 564 - -
Aed4g0456 1840 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1407 1644 IPR027417 -
Aed4g0456 1840 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 580 1266 - -
Aed4g0456 1840 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1265 1607 IPR026082 GO:0016021|GO:0055085|GO:0140359
Aed4g0456 1840 Pfam ABC-2 family transporter protein 940 1342 - -
Aed4g0456 1840 Pfam ABC-2 family transporter protein 162 477 - -
Aed4g0456 1840 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 411 723 IPR027417 -
Aed4g0456 1840 SMART AAA_5 1442 1629 IPR003593 -
Aed4g0456 1840 CDD ABC_subfamily_A 1412 1638 - -
Aed4g0456 1840 Pfam ABC transporter 579 671 IPR003439 GO:0005524
Aed4g0456 1840 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 580 1266 IPR026082 GO:0016021|GO:0055085|GO:0140359
Aed4g0456 1840 Pfam ABC transporter 1434 1576 IPR003439 GO:0005524
Aed4g0456 1840 ProSitePatterns ABC transporters family signature. 643 657 IPR017871 GO:0005524
Aed4g0456 1840 ProSitePatterns ABC transporters family signature. 1549 1563 IPR017871 GO:0005524
Aed4g0456 1840 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 1265 1607 - -
Aed4g0456 1840 CDD ABC_subfamily_A 546 729 - -
Aed4g0456 1840 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 6 564 IPR026082 GO:0016021|GO:0055085|GO:0140359
Aed4g0456 1840 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 1602 1837 - -
Aed4g0456 1840 Gene3D - 517 744 IPR027417 -
Aed4g0456 1840 Gene3D - 1404 1654 IPR027417 -
Aed4g0456 1840 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 514 741 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0456 Aed-Chr4 3400250 3429873 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0456 543 744 Calmodulin-binding Proteins AT2G36910 24.645 1.51e-07 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0456 K05643 - gmx:100803263 3474.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0456 4 3400250 3429873 Aed4g0456 4 3400250 3429873 ECH