Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0455 ATGGCTTCGTCTTCCTCCGATCCGGGAAAGTCCGCGGAGACGTCGGAGGCGGCGGTAGCGGTGGCGGTGGCGGTGGCGAACGATCAGCTCTTGCTCTACAGAGGATTGAAGAAGGCGAAGAAGGAGAGAGGTTGCACCGCCAAAGAGCGCATCAGCAAAATGCCTCCGCATAGATGGACTGGTCGTTATGAAGCGCATCTTTGGGATAAGAGTACGTGGAACCAAAATCAGAATAAGAAGGGAAAGCAAGGGGCGTATGATGACGAGGAAGCAGCAGCTAGAGCATATGATCTTGCTGCTCTCAAATATTGGGGTCCAGGGACTCTCATTAACTTTCCTGTGACCGATTATACAAGAGATCTTGAAGAAATGCAGAATGTGTCGAGAGAAGAGTACCTTGCATCTTTACGGCGGAAGAGCAGCGGTTTTTCAAGAGGACTATCGAAATATCGTGGACTGTCCAGTTTAGCTGTCATAAAGTACATTGATTTTAACATGGATTTGACTGCTAACTTTAACTCTTCATTTCATTTTGCATGTGTTGCTACCAAAATTAGTCGATGGGATCCATCATATGGCCGTATGTCGGGATCTGATTACTTCAATAGCATGCATTATGGGGACGATTCTGCAGCAGAAAGTGACTATGCAAATCGTTATTGCATACAAACAAAGATTGATCTAACAAGTCACATCAAATGGTGGGGATCTAGTAAGACTCGACATTCTGATGCTGGGACAAGATTGTCAGAAGAAAAGAAACTTGGTTCTGCTGGAGATGTGTGCAGTGAACTTAAGCAGTTGGAACAGAAAATTCAACCTACAGAACCTTACCAGATGCCACAGTTAGGCAGGCCACGCAATGAGAAAAATCATAGAAGATCTTCAGTCTCTGCCTTAAGTATCTTGTCTCATTCTGCTGCTTACAAGAGCTTGCAAGAGAAAGCATCAAAGAGACAGGAAAATAACACTGATAATGATGAGAACGAAAACAAAAATACAATCAACAAGTTGGATCATGGCAAGGCGGTTGAGAAACCATCAAATCATGATGGAGGCAATGATCAGCTCAACATTGCAATGGGAATGAGCGGAACAATGTCTCTTCAAAGAAATGTTTATCCATTGACACCATTCTTGTCTGCACCACTTTTAACAACCTACAATACTGTCGATCCATTGGTAGATCCTGTTCTCTGGACATCTCTTGTTCCCATGCTTCCTGCTGGTCCTCGTACAGCTGAGGTTGGTTACAAAGACCGAGACCAGTTCAACTTACACCATGTTTCAGCCAGAGGAATGATTGGACATTTGAATTTCCAGTTGAAGAAGAAAGGCTCAAAGGCAAAAGCATCTGAAAGCTGA 1365 0.441 MASSSSDPGKSAETSEAAVAVAVAVANDQLLLYRGLKKAKKERGCTAKERISKMPPHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSRGLSKYRGLSSLAVIKYIDFNMDLTANFNSSFHFACVATKISRWDPSYGRMSGSDYFNSMHYGDDSAAESDYANRYCIQTKIDLTSHIKWWGSSKTRHSDAGTRLSEEKKLGSAGDVCSELKQLEQKIQPTEPYQMPQLGRPRNEKNHRRSSVSALSILSHSAAYKSLQEKASKRQENNTDNDENENKNTINKLDHGKAVEKPSNHDGGNDQLNIAMGMSGTMSLQRNVYPLTPFLSAPLLTTYNTVDPLVDPVLWTSLVPMLPAGPRTAEVGYKDRDQFNLHHVSARGMIGHLNFQLKKKGSKAKASES 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0455 454 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 177 403 - -
Aed4g0455 454 Gene3D AP2/ERF domain 52 115 IPR036955 GO:0003700|GO:0006355
Aed4g0455 454 ProSiteProfiles AP2/ERF domain profile. 32 113 IPR001471 GO:0003700|GO:0006355
Aed4g0455 454 PANTHER OS03G0770700 PROTEIN 1 154 - -
Aed4g0455 454 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 154 - -
Aed4g0455 454 SUPERFAMILY DNA-binding domain 57 114 IPR016177 GO:0003677
Aed4g0455 454 MobiDBLite consensus disorder prediction 312 355 - -
Aed4g0455 454 PANTHER OS03G0770700 PROTEIN 177 403 - -
Aed4g0455 454 SMART rav1_2 56 119 IPR001471 GO:0003700|GO:0006355
Aed4g0455 454 MobiDBLite consensus disorder prediction 270 297 - -
Aed4g0455 454 MobiDBLite consensus disorder prediction 312 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0455 Aed-Chr4 3393496 3397222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0455 23 429 AP2-EREBP Transcription Factor Family AT2G41710 51.828 1.15e-136 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0455 K09285 - gmx:100814117 644.039