Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0436 ATGCTTGAACAGGAGTGTCTTTTTAGATCTTCACTGTTGCTATGTATTTTTGTTGGATTCTTGCTACATCCTGTTGTGTCAGCTGTGATACCATTGGGTTCCAAACTCTCTGTGGTTGACAATAACTGTTGGGTTTCCTCCAATGGCGATTTTGCATTTGGGTTCTTTAACATTTCAGATGAACCTAACCAGTTTAGTGCCGGCATTCGTTTCAATTCGAAGTCTATACCATATGACCAACAAACAGTGGTCTGGGTTGCTGGTGCTCATGACAAACTTCGCTGGGATAGTCATAGTATATATTGGACAAGTGAAATCCCTTCTGCTTCAAATCTGACTGCATTTCTTACAACTGGTGGAGCTTTGCAACTTCGAGACCAAAGTTTGAAAGCTGTTTGGAGTGTGTTTGGAGAAGACCATAATGATTCTGTGAATTATCGATTTCTTAGGCTAGATGTGGATGGCAATCTTCGCTTATATTCATGGATTGAAGCTTCACAATCGTGGAGATCAGTCTGGCAAGCTGTTCAGAATCAGTGCAAAGTCTTTGCAACATGTGCTCAGCGTGGTGTCTGCGTCTTCACTGCTTCAGGTTCTACTGATTGCTGGTGCCCTTTTGAGGTAACTGAGTCTAACCAATGTTTGGTTCCATATGAACAGGAGTGTGAATCCGGAACCAATATGCTTACATACAAGAACATATATCTGTATGGAATTTATCCTCCTGACGATTCAATTGTCATAAGTAGTTTGCAGCAATGTGAGCAGTTATGTCTGAATGACACGCAGTGTACAGCAGCAACCTTTTCCAACAATGGTAGACCACAATGCTCCATTATAAAAACTAAGTATGTTACCGGCTATGCAGATCCATCTCTAAGTTCAATATCTTTCGTTAAAAGGTGTTCAGGTCCATTTGCTGTAAATCCTGGTCTCACAAAGTCACCTCCACCGAAATTGCCTCCTAAGCTTTGTGTTCCCTGTCTAATGGGAGCAGCCTCAGGAACATTTCTCATCTTTGCTATCCTCCAGCTGGGAATTATTTTCATCATCTTCAGAAGAAAAAAATACTCCACTATGAGAAATGTTTCTTTACCTTTCACAAGCCCAAATCCAAAGGGCTTAAATGTGTTCTCCTTCTCAGAAATCAAGAGCCTCACCCGGGATCTCAAGGATCAAATTGGGCCAAATATGTTCAAGGGTGTGCTACAAAATAATCGCTTGATTGCGGTTAAAGACCTGAATGCATTCATAGAAGAAAGGAAGTTTCGAAGTGCTGTTCTGAAGTTAGGCAACATCCACCACAAGAACCTCATGAAGCTGGAAGGCTATTGTTGCGAGTTCAACCATAGATTTTTGGTGTATGAATATGCCAAAAACGGTTCACTGGATAAATACATAGATGATTGCACTCTTTGCAAGAAGCTAACTTGGAGAAAGAGACTTGAAATATGCTCGAGTGTGGGAAAGGCCATCTGTTATCTGCACACTGGGTGTAGGGAGTTTGTGAGCCATGGGAACTTAAAATGTGAGAATGTCATGTTGGATGAAAACTCAGTGGCCAAGGTGTGTGAATACGGGTTTGCAATAGCAGATGGCGAGGCCACGTACTGCAGCTTTTCAGCCGAGAAGGACGTGGGGGATTTTGGAAAGTTGGTGTTAACCATGTTAACAGGGCGTCAAGATCATGAACAACTTTGTGAGTGGGCTTATACTGAATGGATGGAAGGTAGGGCAGTTAATGTGGTTGATAAAAAACTTGATGATGGTGTTGCCAATTCAGAGGAACTTGAACGTGCATTAAGGATCTCATTCTGGTGCCTTCAAATGGATGAACGTAGAAGACCCTCCATGGAGGAGGTTGTGAGAGTACTGGATAGTACGGTGAGCGTTGATCTGCCACCACCACCATTTGTCTTGCACAGGCCGCTGCCGTTACAGGAAGATGATCCACAAGAAAACGGTTCAGATTAA 1974 0.426 MLEQECLFRSSLLLCIFVGFLLHPVVSAVIPLGSKLSVVDNNCWVSSNGDFAFGFFNISDEPNQFSAGIRFNSKSIPYDQQTVVWVAGAHDKLRWDSHSIYWTSEIPSASNLTAFLTTGGALQLRDQSLKAVWSVFGEDHNDSVNYRFLRLDVDGNLRLYSWIEASQSWRSVWQAVQNQCKVFATCAQRGVCVFTASGSTDCWCPFEVTESNQCLVPYEQECESGTNMLTYKNIYLYGIYPPDDSIVISSLQQCEQLCLNDTQCTAATFSNNGRPQCSIIKTKYVTGYADPSLSSISFVKRCSGPFAVNPGLTKSPPPKLPPKLCVPCLMGAASGTFLIFAILQLGIIFIIFRRKKYSTMRNVSLPFTSPNPKGLNVFSFSEIKSLTRDLKDQIGPNMFKGVLQNNRLIAVKDLNAFIEERKFRSAVLKLGNIHHKNLMKLEGYCCEFNHRFLVYEYAKNGSLDKYIDDCTLCKKLTWRKRLEICSSVGKAICYLHTGCREFVSHGNLKCENVMLDENSVAKVCEYGFAIADGEATYCSFSAEKDVGDFGKLVLTMLTGRQDHEQLCEWAYTEWMEGRAVNVVDKKLDDGVANSEELERALRISFWCLQMDERRRPSMEEVVRVLDSTVSVDLPPPPFVLHRPLPLQEDDPQENGSD 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0436 657 Gene3D - 27 177 IPR036426 -
Aed4g0436 657 PANTHER OS07G0415500 PROTEIN 92 652 - -
Aed4g0436 657 SUPERFAMILY Protein kinase-like (PK-like) 399 625 IPR011009 -
Aed4g0436 657 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 92 652 - -
Aed4g0436 657 Gene3D Transferase(Phosphotransferase) domain 1 458 632 - -
Aed4g0436 657 ProSiteProfiles PAN/Apple domain profile. 222 302 IPR003609 -
Aed4g0436 657 Pfam Protein tyrosine and serine/threonine kinase 404 532 IPR001245 GO:0004672|GO:0006468
Aed4g0436 657 Pfam S-locus glycoprotein domain 141 204 IPR000858 GO:0048544
Aed4g0436 657 ProSiteProfiles Protein kinase domain profile. 337 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0436 657 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 171 IPR036426 -
Aed4g0436 657 PANTHER OS07G0415500 PROTEIN 8 91 - -
Aed4g0436 657 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 8 91 - -
Aed4g0436 657 Gene3D Phosphorylase Kinase; domain 1 353 457 - -
Aed4g0436 657 Pfam PAN domain 241 291 IPR003609 -
Aed4g0436 657 SMART ntp_6 223 301 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0436 Aed-Chr4 3127041 3129323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0436 310 632 Receptor kinase-like Gene Family AT1G56120 28.889 1.04e-36 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aed4g0436 PK_Tyr_Ser-Thr 3.8e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0436 - - gmx:100809478 1026.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0436 4 3127041 3129323 Aed4g0436 4 3127041 3129323 ECH