Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0432 ATGGATACTTGCAAGAAGTCCCCCTTGAAGCCATGGAAGAAAGGGCCAACCAGGGGGAAAGGTGGCCCCCAGAATGCCTCGTGCGAGTACCGGGGTGTTCGGCAGAGAACTTGGGGCAAATGGGTTGCTGAGATAAGAGAGCCAAAGAAGAGAACCAGACTCTGGCTTGGTTCTTTTGCCACAGCTGAAGAAGCTGCCATGGCTTATGATGAGGCTGCAAGGAGACTCTATGGTCCAGATGCATACCTTAATCTTCCCCACCTTCAACCCAGGTCCACTTCAGCTATCACATCAGCAGGGAAGTTCAAATGGTTCCCTTCCAAGAACTTCATTTCAATGTTTCCTTCCTGTGGAATGCTCAATGTCAATGCTCAACCTAGTGTTCATTTAATCCATCAGAGGCTACAAGAGCTTAAGCGAAATTCAGTTGCAAATGCAAGTCAATCCCCATCTAGTTCATCCAATGATCCAAGGGCAGAAATTCAGAATATAGACAGCAAAAAAGATGGAGAAAATCCTCCAGAAGATGCTCAAACGTTGTCAGAGGAGGTGCTTGGAGATCTTCAGGAGAAACCCCAGATAGACCTCCATGAGTTTCTTCAACAGCTGGGAATACTGAAGGAAGAAAATCAGACAGAAAGAACTGATAGCTCAGGAAGTTCAACAGTGCCTGAAGCTGTGTTGATAGATGACAATGATCAATTGGGAGTGTTTTCTGACAATAGTGTTAACTGGGAAGAATTGATTGAGATGCATGGAATTGCAGGTATTCAGGAATCAGAAGAAGTCACCCAGCTTGAAGCATATGACCCAAATGATGACCTTACTTTCTCAACTTCCATTTGGAACTTTTAA 855 0.4491 MDTCKKSPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEAARRLYGPDAYLNLPHLQPRSTSAITSAGKFKWFPSKNFISMFPSCGMLNVNAQPSVHLIHQRLQELKRNSVANASQSPSSSSNDPRAEIQNIDSKKDGENPPEDAQTLSEEVLGDLQEKPQIDLHEFLQQLGILKEENQTERTDSSGSSTVPEAVLIDDNDQLGVFSDNSVNWEELIEMHGIAGIQESEEVTQLEAYDPNDDLTFSTSIWNF 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0432 284 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Aed4g0432 284 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Aed4g0432 284 MobiDBLite consensus disorder prediction 161 175 - -
Aed4g0432 284 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Aed4g0432 284 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Aed4g0432 284 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Aed4g0432 284 CDD AP2 28 88 IPR001471 GO:0003700|GO:0006355
Aed4g0432 284 Pfam AP2 domain 28 78 IPR001471 GO:0003700|GO:0006355
Aed4g0432 284 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Aed4g0432 284 MobiDBLite consensus disorder prediction 142 160 - -
Aed4g0432 284 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2F 1 281 - -
Aed4g0432 284 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 1 281 - -
Aed4g0432 284 MobiDBLite consensus disorder prediction 1 27 - -
Aed4g0432 284 MobiDBLite consensus disorder prediction 142 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0432 Aed-Chr4 3083633 3084487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0432 5 284 AP2-EREBP Transcription Factor Family AT3G57600 53.873 3.71e-93 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed4g0432 AP2 1.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0432 - - gmx:100801311 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0432 4 3083633 3084487 Aed4g0432 4 3083633 3084487 ECH
Aed4g0432 4 3083633 3084487 Aed8g1388 8 18137887 18138973 PCT