Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0422 ATGGCGCAGAAGAAGAAAGCTAGAGTTTCCGACGACGAGGAAATGGAAATGCAGCGTGATCAAACCAGCCTCTACCAGGTTATTGGCGTGGAGAGAACGGCGTCTCAGCAGGAAATAAAGAAGGCTTACTACAAGTTGGCGTTGCGGCTTCATCCCGATAAGAACCCTGGCGATGAGGAAGCTAAAGAGAAATTTCAGCAGCTTCAAAAAGTGATCTCGATTCTTGGGGATGAAGAGAAGCGGGCACTCTATGATCAGACTGGCTGTGTTGATGATGCTGACCTTGCTGGAGATGTTGTTCAGAATCTTCAAGAGTTCTTCAGAACAATGTACAAGAAGGTCTCTGAAGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGATCTGAATCAGAGAAAAATGATTTGATTGATTTGTACAAGAAGTGCAAGGGTAACATGAATAGGCTTTTTTGTTCAATGCTTTGTTCAGATCCTAAACTTGATTCACACCGATTCAAGGATATTCTCGATGAGGCTATAGCTTCTGGAGAACTAAAGGCAAAAAAAGCCTACCAGAAATGGGCTAAGGAAGTATCTGAAATCAAACCGCCCACAAATCCTTTGAGGAGGAGGGAAAAGTCAAATAAGCAGTCAGAAACAGATTTGTGTGCAATCATAGAACAACGCCGAAATGAGAGGAAAGGCCAGTTTGATTCAATGTTCTCATCTCTAGTTTCAAAATATGGTGGAGGTGATATGCCAGAACCTTCTGAAGAGGAGTTCGAAGCTACACGGAGAAAGCTGGAGGCTGGTAGATCCTCTAAAAACTCGAAGCAACCAAAGCGGAAGTAA 834 0.4329 MAQKKKARVSDDEEMEMQRDQTSLYQVIGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDADLAGDVVQNLQEFFRTMYKKVSEADIEEFEANYRGSESEKNDLIDLYKKCKGNMNRLFCSMLCSDPKLDSHRFKDILDEAIASGELKAKKAYQKWAKEVSEIKPPTNPLRRREKSNKQSETDLCAIIEQRRNERKGQFDSMFSSLVSKYGGGDMPEPSEEEFEATRRKLEAGRSSKNSKQPKRK 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0422 277 Gene3D DnaJ domain 7 102 IPR036869 -
Aed4g0422 277 PRINTS DnaJ domain signature 80 99 IPR001623 -
Aed4g0422 277 PRINTS DnaJ domain signature 25 43 IPR001623 -
Aed4g0422 277 PRINTS DnaJ domain signature 43 58 IPR001623 -
Aed4g0422 277 PRINTS DnaJ domain signature 60 80 IPR001623 -
Aed4g0422 277 MobiDBLite consensus disorder prediction 252 270 - -
Aed4g0422 277 ProSiteProfiles dnaJ domain profile. 23 88 IPR001623 -
Aed4g0422 277 CDD DnaJ 25 77 IPR001623 -
Aed4g0422 277 Pfam DnaJ domain 24 85 IPR001623 -
Aed4g0422 277 MobiDBLite consensus disorder prediction 239 277 - -
Aed4g0422 277 SMART dnaj_3 22 80 IPR001623 -
Aed4g0422 277 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 3 273 IPR042977 -
Aed4g0422 277 SUPERFAMILY Chaperone J-domain 20 96 IPR036869 -
Aed4g0422 277 Coils Coil 112 139 - -
Aed4g0422 277 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 3 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0422 Aed-Chr4 3005530 3008365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0422 25 85 C2H2 Transcription Factor Family AT1G74250 37.879 8.59e-08 51.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0422 4 3005530 3008365 Aed8g1398 8 18341057 18344122 PCT